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A well-supported nuclear phylogeny of Poaceae and implications for the evolution of C4 photosynthesis 期刊论文
MOLECULAR PLANT, 2022, 卷号: 15, 期号: 4, 页码: 755-777
作者:  Huang, Weichen;  Zhang, Lin;  Columbus, J. Travis;  Hu, Yi;  Zhao, Yiyong;  Tang, Lin;  Guo, Zhenhua;  Chen, Wenli;  McKain, Michael;  Bartlett, Madelaine;  Huang, Chien-Hsun;  Li, De-Zhu;  Ge, Song;  Ma, Hong
Adobe PDF(3240Kb)  |  收藏  |  浏览/下载：11/0  |  提交时间：2024/03/07
Gramineae  transcriptome  nuclear phylogeny  molecular clock  C4 photosynthesis  ppc gene evolution  
On the Species Delimitation of the Maddenia Group of Prunus (Rosaceae): Evidence From Plastome and Nuclear Sequences and Morphology 期刊论文
FRONTIERS IN PLANT SCIENCE, 2021, 卷号: 12
作者:  Su, Na;  Liu, Bin-bin;  Wang, Jun-ru;  Tong, Ru-chang;  Ren, Chen;  Chang, Zhao-yang;  Zhao, Liang;  Potter, Daniel;  Wen, Jun
Adobe PDF(6786Kb)  |  收藏  |  浏览/下载：83/0  |  提交时间：2023/02/24
Maddenia  Prunus  Rosaceae  barcoding  chloroplast genome  single-copy nuclear genes  species delimitation  
Capturing single-copy nuclear genes, organellar genomes, and nuclear ribosomal DNA from deep genome skimming data for plant phylogenetics: A case study in Vitaceae 期刊论文
JOURNAL OF SYSTEMATICS AND EVOLUTION, 2021, 卷号: 59, 期号: 5, 页码: 1124-1138
作者:  Liu, Bin-Bin;  Ma, Zhi-Yao;  Ren, Chen;  Hodel, Richard G. J.;  Sun, Miao;  Liu, Xiu-Qun;  Liu, Guang-Ning;  Hong, De-Yuan;  Zimmer, Elizabeth A.;  Wen, Jun
Adobe PDF(2650Kb)  |  收藏  |  浏览/下载：70/0  |  提交时间：2023/02/24
deep genome skimming  Hyb-Seq  mitochondrial genes  nuclear ribosomal DNA  single-copy nuclear genes  Vitaceae  
Resolving interspecific relationships within evolutionarily young lineages using RNA-seq data: An example from Pedicularis section Cyathophora (Orobanchaceae) 期刊论文
MOLECULAR PHYLOGENETICS AND EVOLUTION, 2017, 卷号: 107, 页码: 345-355
作者:  Wang, Hong-Juan;  Li, Wei-Tao;  Liu, Ya-Nan;  Yang, Fu-Sheng;  Wang, Xiao-Quan
Adobe PDF(1607Kb)  |  收藏  |  浏览/下载：111/0  |  提交时间：2022/03/28
Non-neutral gene  Phylogenomics  Phylogeny  Recent radiation  Selective pressure  Transcriptome  
Range-wide multilocus phylogenetic analyses of Pedicularis sect. Cyathophora (Orobanchaceae): Implications for species delimitation and speciation 期刊论文
TAXON, 2015, 卷号: 64, 期号: 5, 页码: 959-974
作者:  Wang, Hong-Juan;  Li, Wei-Tao;  Liu, Ya-Nan;  Yang, Fu-Sheng;  Wang, Xiao-Quan
Adobe PDF(4846Kb)  |  收藏  |  浏览/下载：77/0  |  提交时间：2022/09/13
molecular dating  molecular phylogeny  Pedicularis  sect. Cyathophora  single/low-copy nuclear genes  species delimitation  
Reticulate evolution and sea-level fluctuations together drove species diversification of slipper orchids (Paphiopedilum) in South-East Asia 期刊论文
MOLECULAR ECOLOGY, 2015, 卷号: 24, 期号: 11, 页码: 2838-2855
作者:  Guo, Yan-Yan;  Luo, Yi-Bo;  Liu, Zhong-Jian;  Wang, Xiao-Quan
Adobe PDF(2260Kb)  |  收藏  |  浏览/下载：73/0  |  提交时间：2022/09/13
biogeography  hybridization  molecular phylogeny  Orchidaceae  Paphiopedilum  speciation  
Molecular phylogenetics and evolutionary history of sect. Quinquefoliae (Pinus): Implications for Northern Hemisphere biogeography 期刊论文
MOLECULAR PHYLOGENETICS AND EVOLUTION, 2015, 卷号: 87, 页码: 65-79
作者:  Hao, Zhen-Zhen;  Liu, Yan-Yan;  Nazaire, Mare;  Wei, Xiao-Xin;  Wang, Xiao-Quan
Adobe PDF(2897Kb)  |  收藏  |  浏览/下载：77/1  |  提交时间：2022/09/13
Molecular phylogeny  Biogeography  Hybridization and introgression  Cytoplasmic DNA  Low-copy nuclear genes  White pines  
Resolution of deep angiosperm phylogeny using conserved nuclear genes and estimates of early divergence times 期刊论文
NATURE COMMUNICATIONS, 2014, 卷号: 5
作者:  Zeng, Liping;  Zhang, Qiang;  Sun, Renran;  Kong, Hongzhi;  Zhang, Ning;  Ma, Hong
Adobe PDF(738Kb)  |  收藏  |  浏览/下载：50/0  |  提交时间：2023/03/30
Identification of nuclear low-copy genes and their phylogenetic utility in rosids 期刊论文
GENOME, 2014, 卷号: 57, 期号: 10, 页码: 547-554
作者:  Wang, Baohua;  Zhang, Yan;  Wei, Peipei;  Sun, Miao;  Ma, Xiaofei;  Zhu, Xinyu
Adobe PDF(340Kb)  |  收藏  |  浏览/下载：61/0  |  提交时间：2023/03/30
rosids  low-copy nuclear gene  KOGs  phylogenetics  
Exploring the utility of three nuclear regions to reconstruct reticulate evolution in the fern genus Asplenium 期刊论文
JOURNAL OF SYSTEMATICS AND EVOLUTION, 2013, 卷号: 51, 期号: 2, 页码: 142-153
作者:  Schneider, Harald;  Navarro-Gomez, Adriana;  Russell, Stephen J.;  Ansell, Stephen;  Grundmann, Michal;  Vogel, Johannes
Adobe PDF(697Kb)  |  收藏  |  浏览/下载：48/0  |  提交时间：2023/04/25
ferns  gapCp  GAPDH  hybridization  introgression  nrITS  nuclear genes  pgiC  reticulate evolution