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New insights into the phylogeny and evolution of Podocarpaceae inferred from transcriptomic data 期刊论文
MOLECULAR PHYLOGENETICS AND EVOLUTION, 2022, 卷号: 166
作者:  Chen, Luo;  Jin, Wei-Tao;  Liu, Xin-Quan;  Wang, Xiao-Quan
Adobe PDF(3368Kb)  |  收藏  |  浏览/下载：9/0  |  提交时间：2024/03/07
Podocarpaceae  Phylogenomics  Biogeography  Morphological character evolution  Gondwana  
The Cycas genome and the early evolution of seed plants 期刊论文
NATURE PLANTS, 2022, 卷号: 8, 期号: 4, 页码: 389+
作者:  Liu, Yang;  Wang, Sibo;  Li, Linzhou;  Yang, Ting;  Dong, Shanshan;  Wei, Tong;  Wu, Shengdan;  Liu, Yongbo;  Gong, Yiqing;  Feng, Xiuyan;  Ma, Jianchao;  Chang, Guanxiao;  Huang, Jinling;  Yang, Yong;  Wang, Hongli;  Liu, Min;  Xu, Yan;  Liang, Hongping;  Yu, Jin;  Cai, Yuqing;  Zhang, Zhaowu;  Fan, Yannan;  Mu, Weixue;  Sahu, Sunil Kumar;  Liu, Shuchun;  Lang, Xiaoan;  Yang, Leilei;  Li, Na;  Habib, Sadaf;  Yang, Yongqiong;  Lindstrom, Anders J.;  Liang, Pei;  Goffinet, Bernard;  Zaman, Sumaira;  Wegrzyn, Jill L.;  Li, Dexiang;  Liu, Jian;  Cui, Jie;  Sonnenschein, Eva C.;  Wang, Xiaobo;  Ruan, Jue;  Xue, Jia-Yu;  Shao, Zhu-Qing;  Song, Chi;  Fan, Guangyi;  Li, Zhen;  Zhang, Liangsheng;  Liu, Jianquan;  Liu, Zhong-Jian;  Jiao, Yuannian;  Wang, Xiao-Quan;  Wu, Hong;  Wang, Ertao;  Lisby, Michael;  Yang, Huanming;  Wang, Jian;  Liu, Xin;  Xu, Xun;  Li, Nan;  Soltis, Pamela S.;  Van de Peer, Yves;  Soltis, Douglas E.;  Gong, Xun;  Liu, Huan;  Zhang, Shouzhou
Adobe PDF(10553Kb)  |  收藏  |  浏览/下载：18/0  |  提交时间：2024/03/07
A Comprehensive Evolutionary Study of Chloroplast RNA Editing in Gymnosperms: A Novel Type of G-to-A RNA Editing Is Common in Gymnosperms 期刊论文
INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES, 2022, 卷号: 23, 期号: 18
作者:  Huang, Kai-Yuan;  Kan, Sheng-Long;  Shen, Ting-Ting;  Gong, Pin;  Feng, Yuan-Yuan;  Du, Hong;  Zhao, Yun-Peng;  Wan, Tao;  Wang, Xiao-Quan;  Ran, Jin-Hua
Adobe PDF(6332Kb)  |  收藏  |  浏览/下载：14/0  |  提交时间：2024/03/07
gymnosperms  chloroplast  RNA editing  G-to-A  GC content  
Unbiased Subgenome Evolution in Allotetraploid Species of Ephedra and Its Implications for the Evolution of Large Genomes in Gymnosperms 期刊论文
GENOME BIOLOGY AND EVOLUTION, 2021, 卷号: 13, 期号: 2
作者:  Wu, Hui;  Yu, Qiong;  Ran, Jin-Hua;  Wang, Xiao-Quan
Adobe PDF(491Kb)  |  收藏  |  浏览/下载：72/0  |  提交时间：2023/02/24
transcriptome  genome evolution  unbiased subgenome evolution  allotetraploid  Ephedra  gymnosperm  
Both Conifer II and Gnetales are characterized by a high frequency of ancient mitochondrial gene transfer to the nuclear genome 期刊论文
BMC BIOLOGY, 2021, 卷号: 19, 期号: 1
作者:  Kan, Sheng-Long;  Shen, Ting-Ting;  Ran, Jin-Hua;  Wang, Xiao-Quan
Adobe PDF(2458Kb)  |  收藏  |  浏览/下载：75/0  |  提交时间：2023/02/24
Mitochondrial gene transfer  Gene content variation  Evolutionary fate  Gymnosperm  Conifer II  Gnetales  
The complete mitochondrial genome of Taxus cuspidata (Taxaceae): eight protein-coding genes have transferred to the nuclear genome 期刊论文
BMC EVOLUTIONARY BIOLOGY, 2020, 卷号: 20, 期号: 1
作者:  Kan, Sheng-Long;  Shen, Ting-Ting;  Gong, Ping;  Ran, Jin-Hua;  Wang, Xiao-Quan
Adobe PDF(4430Kb)  |  收藏  |  浏览/下载：110/0  |  提交时间：2022/03/01
Taxus cuspidata  Mitogenome  Endosymbiotic gene transfer  RNA editing  Gymnosperms  
Phylogenomics resolves the deep phylogeny of seed plants and indicates partial convergent or homoplastic evolution between Gnetales and angiosperms 期刊论文
PROCEEDINGS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES, 2018, 卷号: 285, 期号: 1881
作者:  Ran, Jin-Hua;  Shen, Ting-Ting;  Wang, Ming-Ming;  Wang, Xiao-Quan
Adobe PDF(728Kb)  |  收藏  |  浏览/下载：98/0  |  提交时间：2022/02/25
seed plants  gymnosperms  Gnepine hypothesis  phylotranscriptomics  phylogeny  homoplasy  
Phylogeny and evolutionary history of Pinaceae updated by transcriptomic analysis 期刊论文
MOLECULAR PHYLOGENETICS AND EVOLUTION, 2018, 卷号: 129, 页码: 106-116
作者:  Ran, Jin-Hua;  Shen, Ting-Ting;  Wu, Hui;  Gong, Xun;  Wang, Xiao-Quan
Adobe PDF(2721Kb)  |  收藏  |  浏览/下载：83/0  |  提交时间：2022/02/25
Phylogenomics  Divergence times  Convergence  Cathaya  Cedrus  Pinaceae  
A high frequency of allopolyploid speciation in the gymnospermous genus Ephedra and its possible association with some biological and ecological features 期刊论文
MOLECULAR ECOLOGY, 2016, 卷号: 25, 期号: 5, 页码: 1192-1210
作者:  Wu, Hui;  Ma, Zhen;  Wang, Ming-Ming;  Qin, Ai-Li;  Ran, Jin-Hua;  Wang, Xiao-Quan
Adobe PDF(1653Kb)  |  收藏  |  浏览/下载：74/0  |  提交时间：2022/07/08
ecological divergence  Ephedra  gymnosperm  hybridization  molecular phylogeny  polyploid speciation  
Revisiting the phosphatidylethanolamine-binding protein (PEBP) gene family reveals cryptic FLOWERING LOCUS T gene homologs in gymnosperms and sheds new light on functional evolution 期刊论文
NEW PHYTOLOGIST, 2016, 卷号: 212, 期号: 3, 页码: 730-744
作者:  Liu, Yan-Yan;  Yang, Ke-Zhen;  Wei, Xiao-Xin;  Wang, Xiao-Quan
Adobe PDF(2391Kb)  |  收藏  |  浏览/下载：80/0  |  提交时间：2022/07/08
FLOWERING LOCUS T (FT)  functional evolution  gene and genome duplication  gymnosperms  molecular phylogeny  phosphatidylethanolamine-binding protein (PEBP) gene family  seed plants