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Mitochondrial genes from 18 angiosperms fill sampling gaps for phylogenomic inferences of the early diversification of flowering plants 期刊论文
JOURNAL OF SYSTEMATICS AND EVOLUTION, 2022, 卷号: 60, 期号: 4, 页码: 773-788
作者:  Xue, Jia-Yu;  Dong, Shan-Shan;  Wang, Ming-Qiang;  Song, Tian-Qiang;  Zhou, Guang-Can;  Li, Zhen;  Van de Peer, Yves;  Shao, Zhu-Qing;  Wang, Wei;  Chen, Min;  Zhang, Yan-Mei;  Sun, Xiao-Qin;  Chen, Hong-Feng;  Zhang, Yong-Xia;  Zhang, Shou-Zhou;  Chen, Fei;  Zhang, Liang-Sheng;  Cox, Cymon;  Liu, Yang;  Wang, Qiang;  Hang, Yue-Yu
Adobe PDF(1723Kb)  |  收藏  |  浏览/下载：11/0  |  提交时间：2024/03/07
early angiosperm radiation  incongruence  mitochondrial genome  phylogenomics  systematic error  
Phylogenomic conflict analyses in the apple genus Malus s.l. reveal widespread hybridization and allopolyploidy driving diversification, with insights into the complex biogeographic history in the Northern Hemisphere 期刊论文
JOURNAL OF INTEGRATIVE PLANT BIOLOGY, 2022, 卷号: 64, 期号: 5, 页码: 1020-1043
作者:  Liu, Bin-Bin;  Ren, Chen;  Kwak, Myounghai;  Hodel, Richard G. J.;  Xu, Chao;  He, Jian;  Zhou, Wen-Bin;  Huang, Chien-Hsun;  Ma, Hong;  Qian, Guan-Ze;  Hong, De-Yuan;  Wen, Jun
Adobe PDF(3053Kb)  |  收藏  |  浏览/下载：15/0  |  提交时间：2024/03/07
deep genome skimming  genomic discordance  historical biogeography  massive extinction  reticulate evolution  single-copy nuclear genes  
Phylogenomic approaches untangle early divergences and complex diversifications of the olive plant family 期刊论文
BMC BIOLOGY, 2022, 卷号: 20, 期号: 1
作者:  Dong, Wenpan;  Li, Enze;  Liu, Yanlei;  Xu, Chao;  Wang, Yushuang;  Liu, Kangjia;  Cui, Xingyong;  Sun, Jiahui;  Suo, Zhili;  Zhang, Zhixiang;  Wen, Jun;  Zhou, Shiliang
Adobe PDF(4457Kb)  |  收藏  |  浏览/下载：13/0  |  提交时间：2024/03/07
Ancient introgression  Gene tree conflict  Incomplete lineage sorting  Oleaceae  Phylogenomics  Rate heterogeneity  
Synthesis of Nuclear and Chloroplast Data Combined With Network Analyses Supports the Polyploid Origin of the Apple Tribe and the Hybrid Origin of the Maleae-Gillenieae Clade 期刊论文
FRONTIERS IN PLANT SCIENCE, 2022, 卷号: 12
作者:  Hodel, Richard G. J.;  Zimmer, Elizabeth A.;  Liu, Bin-Bin;  Wen, Jun
Adobe PDF(3910Kb)  |  收藏  |  浏览/下载：13/0  |  提交时间：2024/03/07
allopolyploidy  ancient hybridization  cytonuclear conflict  genome doubling  phylogenetic networks  phylogenomics  reticulate evolution  
Plastid phylogenomic analyses of the Selaginella sanguinolenta group (Selaginellaceae) reveal conflict signatures resulting from sequence types, outlier genes, and pervasive RNA editing 期刊论文
MOLECULAR PHYLOGENETICS AND EVOLUTION, 2022, 卷号: 173
作者:  Zhang, Meng-Hua;  Xiang, Qiao-Ping;  Zhang, Xian-Chun
Adobe PDF(5084Kb)  |  收藏  |  浏览/下载：13/0  |  提交时间：2024/03/07
Alternative topologies  Gene-tree conflict  Plastome  Phylogenetic signal  Selaginella sanguinolenta group  Species trees