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Stepwise selection of natural variations at CTB2 and CTB4a improves cold adaptation during domestication of japonica rice 期刊论文
NEW PHYTOLOGIST, 2021, 卷号: 231, 期号: 3, 页码: 1056-1072
作者:  Li, Jilong;  Zeng, Yawen;  Pan, Yinghua;  Zhou, Lei;  Zhang, Zhanying;  Guo, Haifeng;  Lou, Qijin;  Shui, Guanghou;  Huang, Hanguang;  Tian, He;  Guo, Yongmei;  Yuan, Pingrong;  Yang, Hong;  Pan, Guojun;  Wang, Ruiying;  Zhang, Hongliang;  Yang, Shuhua;  Guo, Yan;  Ge, Song;  Li, Jinjie;  Li, Zichao
Adobe PDF(2933Kb)  |  收藏  |  浏览/下载：76/0  |  提交时间：2023/02/24
cold adaptation  de novo mutation  rice  standing variation  stepwise selection  
Genome-wide investigation on transcriptional responses to drought stress in wild and cultivated rice 期刊论文
ENVIRONMENTAL AND EXPERIMENTAL BOTANY, 2021, 卷号: 189
作者:  Geng, Mu-Fan;  Wang, Xiu-Hua;  Wang, Mei-Xia;  Cai, Zhe;  Meng, Qing-Lin;  Wang, Xin;  Zhou, Lian;  Han, Jing-Dan;  Li, Ji-Long;  Zhang, Fu-Min;  Guo, Ya-Long;  Ge, Song
Adobe PDF(3006Kb)  |  收藏  |  浏览/下载：80/0  |  提交时间：2023/02/24
Drought stress  RNA-seq  WGCNA  Genomic hotspot  Cultivated and wild rice  
Divergence in flowering time is a major component contributing to reproductive isolation between two wild rice species (Oryza rufipogon and O. nivara) 期刊论文
SCIENCE CHINA-LIFE SCIENCES, 2020, 卷号: 63, 期号: 11, 页码: 1714-1724
作者:  Xu, Xun;  Meng, Qing-Lin;  Geng, Mu-Fan;  Ren, Ning-Ning;  Zhou, Lian;  Du, Yu-Su;  Cai, Zhe;  Wang, Mei-Xia;  Wang, Xin;  Wang, Xiu-Hua;  Han, Jing-Dan;  Jiang, Shuai;  Jing, Chun-Yan;  Liu, Rong;  Zheng, Xiao-Ming;  Yang, Qing-Wen;  Zhang, Fu-Min;  Ge, Song
Adobe PDF(899Kb)  |  收藏  |  浏览/下载：120/0  |  提交时间：2022/03/01
reproductive isolation  flowering time  speciation  adaptation  Oryza species  
Parallel Speciation of Wild Rice Associated with Habitat Shifts 期刊论文
MOLECULAR BIOLOGY AND EVOLUTION, 2019, 卷号: 36, 期号: 5, 页码: 875-889
作者:  Cai, Zhe;  Zhou, Lian;  Ren, Ning-Ning;  Xu, Xun;  Liu, Rong;  Huang, Lei;  Zheng, Xiao-Ming;  Meng, Qing-Lin;  Du, Yu-Su;  Wang, Mei-Xia;  Geng, Mu-Fan;  Chen, Wen-Li;  Jing, Chun-Yan;  Zou, Xin-Hui;  Guo, Jie;  Chen, Cheng-Bin;  Zeng, Hua-Zhong;  Liang, Yun-Tao;  Wei, Xing-Hua;  Guo, Ya-Long;  Zhou, Hai-Fei;  Zhang, Fu-Min;  Ge, Song
Adobe PDF(887Kb)  |  收藏  |  浏览/下载：2618/0  |  提交时间：2022/01/06
parallel speciation  reproductive isolation  adaptation  divergent selection  wild rice  
Liriodendron genome sheds light on angiosperm phylogeny and species-pair differentiation 期刊论文
NATURE PLANTS, 2019, 卷号: 5, 期号: 1, 页码: 18-25
作者:  Chen, Jinhui;  Hao, Zhaodong;  Guang, Xuanmin;  Zhao, Chenxi;  Wang, Pengkai;  Xue, Liangjiao;  Zhu, Qihui;  Yang, Linfeng;  Sheng, Yu;  Zhou, Yanwei;  Xu, Haibin;  Xie, Hongqing;  Long, Xiaofei;  Zhang, Jin;  Wang, Zhangrong;  Shi, Mingming;  Lu, Ye;  Liu, Siqin;  Guan, Lanhua;  Zhu, Qianhua;  Yang, Liming;  Ge, Song;  Cheng, Tielong;  Laux, Thomas;  Gao, Qiang;  Peng, Ye;  Liu, Na;  Yang, Sihai;  Shi, Jisen
Adobe PDF(3229Kb)  |  收藏  |  浏览/下载：152/0  |  提交时间：2022/01/06
Population genetics and evolutionary history of Miscanthus species in China 期刊论文
JOURNAL OF SYSTEMATICS AND EVOLUTION, 2019, 卷号: 57, 期号: 5, 页码: 530-542
作者:  Li, Shan-Shan;  Zhou, Hai-Fei;  Chen, Wen-Li;  Yan, Juan;  Cai, Zhe;  Wei, Ruo-Xun;  Chen, Chih-Hui;  Han, Bin;  Li, Jian-Qiang;  Sang, Tao;  Ge, Song
Adobe PDF(1772Kb)  |  收藏  |  浏览/下载：140/0  |  提交时间：2022/01/06
energy crop  genetic structure  Miscanthus  population dynamics  speciation  
A selfish genetic element confers non-Mendelian inheritance in rice 期刊论文
SCIENCE, 2018, 卷号: 360, 期号: 6393, 页码: 1130-1132
作者:  Yu, Xiaowen;  Zhao, Zhigang;  Zheng, Xiaoming;  Zhou, Jiawu;  Kong, Weiyi;  Wang, Peiran;  Bai, Wenting;  Zheng, Hai;  Zhang, Huan;  Li, Jing;  Liu, Jiafan;  Wang, Qiming;  Zhang, Long;  Liu, Kai;  Yu, Yang;  Guo, Xiuping;  Wang, Jiulin;  Lin, Qibing;  Wu, Fuqing;  Ren, Yulong;  Zhu, Shanshan;  Zhang, Xin;  Cheng, Zhijun;  Lei, Cailin;  Liu, Shijia;  Liu, Xi;  Tian, Yunlu;  Jiang, Ling;  Ge, Song;  Wu, Chuanyin;  Tao, Dayun;  Wang, Haiyang;  Wan, Jianmin
Adobe PDF(1074Kb)  |  收藏  |  浏览/下载：89/0  |  提交时间：2022/02/25
Genomic variation associated with local adaptation of weedy rice during de-domestication 期刊论文
NATURE COMMUNICATIONS, 2017, 卷号: 8
作者:  Qiu, Jie;  Zhou, Yongjun;  Mao, Lingfeng;  Ye, Chuyu;  Wang, Weidi;  Zhang, Jianping;  Yu, Yongyi;  Fu, Fei;  Wang, Yunfei;  Qian, Feijian;  Qi, Ting;  Wu, Sanling;  Sultana, Most Humaira;  Cao, Ya-Nan;  Wang, Yu;  Timko, Michael P.;  Ge, Song;  Fan, Longjiang;  Lu, Yongliang
Adobe PDF(551Kb)  |  收藏  |  浏览/下载：109/0  |  提交时间：2022/03/28
Draft genome of the living fossil Ginkgo biloba 期刊论文
GIGASCIENCE, 2016, 卷号: 5
作者:  Guan, Rui;  Zhao, Yunpeng;  Zhang, He;  Fan, Guangyi;  Liu, Xin;  Zhou, Wenbin;  Shi, Chengcheng;  Wang, Jiahao;  Liu, Weiqing;  Liang, Xinming;  Fu, Yuanyuan;  Ma, Kailong;  Zhao, Lijun;  Zhang, Fumin;  Lu, Zuhong;  Lee, Simon Ming-Yuen;  Xu, Xun;  Wang, Jian;  Yang, Huanming;  Fu, Chengxin;  Ge, Song;  Chen, Wenbin
Adobe PDF(1060Kb)  |  收藏  |  浏览/下载：104/0  |  提交时间：2022/07/08
Ginkgo genome  Evolution of LTR-RTs  Tandem gene duplication  Plant defense mechanism  Gymnosperm evolution  Whole genome duplication  
Widespread and Adaptive Alterations in Genome-Wide Gene Expression Associated with Ecological Divergence of Two Oryza Species 期刊论文
MOLECULAR BIOLOGY AND EVOLUTION, 2016, 卷号: 33, 期号: 1, 页码: 62-78
作者:  Guo, Jie;  Liu, Rong;  Huang, Lei;  Zheng, Xiao-Ming;  Liu, Ping-Li;  Du, Yu-Su;  Cai, Zhe;  Zhou, Lian;  Wei, Xing-Hua;  Zhang, Fu-Min;  Ge, Song
Adobe PDF(782Kb)  |  收藏  |  浏览/下载：82/0  |  提交时间：2022/07/08
ecological speciation  expression evolution  adaptation  wild rice