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A well-supported nuclear phylogeny of Poaceae and implications for the evolution of C4 photosynthesis 期刊论文
MOLECULAR PLANT, 2022, 卷号: 15, 期号: 4, 页码: 755-777
作者:  Huang, Weichen;  Zhang, Lin;  Columbus, J. Travis;  Hu, Yi;  Zhao, Yiyong;  Tang, Lin;  Guo, Zhenhua;  Chen, Wenli;  McKain, Michael;  Bartlett, Madelaine;  Huang, Chien-Hsun;  Li, De-Zhu;  Ge, Song;  Ma, Hong
Adobe PDF(3240Kb)  |  收藏  |  浏览/下载：23/0  |  提交时间：2024/03/07
Gramineae  transcriptome  nuclear phylogeny  molecular clock  C4 photosynthesis  ppc gene evolution  
Divergence in flowering time is a major component contributing to reproductive isolation between two wild rice species (Oryza rufipogon and O. nivara) 期刊论文
SCIENCE CHINA-LIFE SCIENCES, 2020, 卷号: 63, 期号: 11, 页码: 1714-1724
作者:  Xu, Xun;  Meng, Qing-Lin;  Geng, Mu-Fan;  Ren, Ning-Ning;  Zhou, Lian;  Du, Yu-Su;  Cai, Zhe;  Wang, Mei-Xia;  Wang, Xin;  Wang, Xiu-Hua;  Han, Jing-Dan;  Jiang, Shuai;  Jing, Chun-Yan;  Liu, Rong;  Zheng, Xiao-Ming;  Yang, Qing-Wen;  Zhang, Fu-Min;  Ge, Song
Adobe PDF(899Kb)  |  收藏  |  浏览/下载：129/0  |  提交时间：2022/03/01
reproductive isolation  flowering time  speciation  adaptation  Oryza species  
Decrease of gene expression diversity during domestication of animals and plants 期刊论文
BMC EVOLUTIONARY BIOLOGY, 2019, 卷号: 19
作者:  Liu, Wei;  Chen, Lei;  Zhang, Shilai;  Hu, Fengyi;  Wang, Zheng;  Lyu, Jun;  Wang, Bao;  Xiang, Hui;  Zhao, Ruoping;  Tian, Zhixi;  Ge, Song;  Wang, Wen
Adobe PDF(845Kb)  |  收藏  |  浏览/下载：101/0  |  提交时间：2022/01/06
Domestication  Decrease  Gene expression diversity  
Parallel Speciation of Wild Rice Associated with Habitat Shifts 期刊论文
MOLECULAR BIOLOGY AND EVOLUTION, 2019, 卷号: 36, 期号: 5, 页码: 875-889
作者:  Cai, Zhe;  Zhou, Lian;  Ren, Ning-Ning;  Xu, Xun;  Liu, Rong;  Huang, Lei;  Zheng, Xiao-Ming;  Meng, Qing-Lin;  Du, Yu-Su;  Wang, Mei-Xia;  Geng, Mu-Fan;  Chen, Wen-Li;  Jing, Chun-Yan;  Zou, Xin-Hui;  Guo, Jie;  Chen, Cheng-Bin;  Zeng, Hua-Zhong;  Liang, Yun-Tao;  Wei, Xing-Hua;  Guo, Ya-Long;  Zhou, Hai-Fei;  Zhang, Fu-Min;  Ge, Song
Adobe PDF(887Kb)  |  收藏  |  浏览/下载：2817/0  |  提交时间：2022/01/06
parallel speciation  reproductive isolation  adaptation  divergent selection  wild rice  
Population genetics and evolutionary history of the wild rice species Oryza rufipogon and O-nivara in Sri Lanka 期刊论文
ECOLOGY AND EVOLUTION, 2018, 卷号: 8, 期号: 23, 页码: 12056-12065
作者:  Sandamal, Salinda;  Tennakoon, Asanka;  Meng, Qing-Lin;  Marambe, Buddhi;  Ratnasekera, Disna;  Melo, Arthur;  Ge, Song
Adobe PDF(1252Kb)  |  收藏  |  浏览/下载：98/0  |  提交时间：2022/02/25
evolutionary history  O. nivara  O. rufipogon  population genetics  Sri Lanka  
Natural Variation in the Promoter of GSE5 Contributes to Grain Size Diversity in Rice 期刊论文
MOLECULAR PLANT, 2017, 卷号: 10, 期号: 5, 页码: 685-694
作者:  Duan, Penggen;  Xu, Jinsong;  Zeng, Dali;  Zhang, Baolan;  Geng, Mufan;  Zhang, Guozheng;  Huang, Ke;  Huang, Luojiang;  Xu, Ran;  Ge, Song;  Qian, Qian;  Li, Yunhai
Adobe PDF(929Kb)  |  收藏  |  浏览/下载：100/0  |  提交时间：2022/03/28
rice  natural variation  GSE5  grain size  cell proliferation  
Widespread and Adaptive Alterations in Genome-Wide Gene Expression Associated with Ecological Divergence of Two Oryza Species 期刊论文
MOLECULAR BIOLOGY AND EVOLUTION, 2016, 卷号: 33, 期号: 1, 页码: 62-78
作者:  Guo, Jie;  Liu, Rong;  Huang, Lei;  Zheng, Xiao-Ming;  Liu, Ping-Li;  Du, Yu-Su;  Cai, Zhe;  Zhou, Lian;  Wei, Xing-Hua;  Zhang, Fu-Min;  Ge, Song
Adobe PDF(782Kb)  |  收藏  |  浏览/下载：96/0  |  提交时间：2022/07/08
ecological speciation  expression evolution  adaptation  wild rice  
Multilocus species tree analyses resolve the ancient radiation of the subtribe Zizaniinae (Poaceae) 期刊论文
MOLECULAR PHYLOGENETICS AND EVOLUTION, 2015, 卷号: 84, 页码: 232-239
作者:  Tang, Liang;  Zou, Xin-hui;  Zhang, Lin-bin;  Ge, Song
Adobe PDF(1289Kb)  |  收藏  |  浏览/下载：79/0  |  提交时间：2022/09/13
Ancient rapid radiation  Incomplete lineage sorting  Multilocus data  Species tree  Zizaniinae  
A host plant genome (Zizania latifolia) after a century-long endophyte infection 期刊论文
PLANT JOURNAL, 2015, 卷号: 83, 期号: 4, 页码: 600-609
作者:  Guo, Longbiao;  Qiu, Jie;  Han, Zujing;  Ye, Zihong;  Chen, Chao;  Liu, Chuanjun;  Xin, Xiufang;  Ye, Chu-Yu;  Wang, Ying-Ying;  Xie, Hongqing;  Wang, Yu;  Bao, Jiandong;  Tang, She;  Xu, Jie;  Gui, Yijie;  Fu, Fei;  Wang, Weidi;  Zhang, Xingchen;  Zhu, Qianhua;  Guang, Xuanmin;  Wang, Chongzhi;  Cui, Haifeng;  Cai, Daguang;  Ge, Song;  Tuskan, Gerald A.;  Yang, Xiaohan;  Qian, Qian;  He, Sheng Yang;  Wang, Jun;  Zhou, Xue-Ping;  Fan, Longjiang
Adobe PDF(1121Kb)  |  收藏  |  浏览/下载：101/0  |  提交时间：2022/09/13
host-microbe interaction  genome  resistance gene analogs  Zizania  Jiaobai  
Population genetic structure of Oryza rufipogon and Oryza nivara: implications for the origin of O.nivara 期刊论文
MOLECULAR ECOLOGY, 2015, 卷号: 24, 期号: 20, 页码: 5211-5228
作者:  Liu, Rong;  Zheng, Xiao-Ming;  Zhou, Lian;  Zhou, Hai-Fei;  Ge, Song
Adobe PDF(1859Kb)  |  收藏  |  浏览/下载：75/0  |  提交时间：2022/09/13
ecological speciation  population genetic structure  adaptation  wild rice