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Species delimitation of the liquorice tribe (Leguminosae: Glycyrrhizeae) based on phylogenomic and machine learning analyses 期刊论文
JOURNAL OF SYSTEMATICS AND EVOLUTION, 2023, 卷号: 61, 期号: 1, 页码: 22-41
作者:  Duan, Lei;  Han, Li-Na;  Liu, Bin-Bin;  Leostrin, Artem;  Harris, A. J.;  Wang, Lin;  Arslan, Emine;  Ertugrul, Kuddisi;  Knyazev, Mikhail;  Hantemirova, Elena;  Wen, Jun;  Chen, Hong-Feng
Adobe PDF(1597Kb)  |  收藏  |  浏览/下载：104/0  |  提交时间：2024/03/07
character evolution  Glycyrrhiza  machine learning analysis  medicinal group  phylogenomics  species delimitation  
Mitochondrial genes from 18 angiosperms fill sampling gaps for phylogenomic inferences of the early diversification of flowering plants 期刊论文
JOURNAL OF SYSTEMATICS AND EVOLUTION, 2022, 卷号: 60, 期号: 4, 页码: 773-788
作者:  Xue, Jia-Yu;  Dong, Shan-Shan;  Wang, Ming-Qiang;  Song, Tian-Qiang;  Zhou, Guang-Can;  Li, Zhen;  Van de Peer, Yves;  Shao, Zhu-Qing;  Wang, Wei;  Chen, Min;  Zhang, Yan-Mei;  Sun, Xiao-Qin;  Chen, Hong-Feng;  Zhang, Yong-Xia;  Zhang, Shou-Zhou;  Chen, Fei;  Zhang, Liang-Sheng;  Cox, Cymon;  Liu, Yang;  Wang, Qiang;  Hang, Yue-Yu
Adobe PDF(1723Kb)  |  收藏  |  浏览/下载：38/0  |  提交时间：2024/03/07
early angiosperm radiation  incongruence  mitochondrial genome  phylogenomics  systematic error  
Loss of innovative traits underlies multiple origins of Aquilegia ecalcarata 期刊论文
JOURNAL OF SYSTEMATICS AND EVOLUTION, 2022, 卷号: 60, 期号: 6, 页码: 1291-1302
作者:  Geng, Fang-Dong;  Xie, Jing-He;  Xue, Cheng;  Sun, Li;  Li, Jiao-Jie;  Niu, Chen-Yu;  Huang, Lei;  Zhang, Xiao-Hui;  Kang, Ju-Qing;  Kong, Hong-Zhi;  Ren, Yi;  Zhang, Jian-Qiang
Adobe PDF(3573Kb)  |  收藏  |  浏览/下载：35/0  |  提交时间：2024/03/07
Aquilegia  divergence  ecalcarata  gene introgression  parallel origion  Spurless  
Capturing single-copy nuclear genes, organellar genomes, and nuclear ribosomal DNA from deep genome skimming data for plant phylogenetics: A case study in Vitaceae 期刊论文
JOURNAL OF SYSTEMATICS AND EVOLUTION, 2021, 卷号: 59, 期号: 5, 页码: 1124-1138
作者:  Liu, Bin-Bin;  Ma, Zhi-Yao;  Ren, Chen;  Hodel, Richard G. J.;  Sun, Miao;  Liu, Xiu-Qun;  Liu, Guang-Ning;  Hong, De-Yuan;  Zimmer, Elizabeth A.;  Wen, Jun
Adobe PDF(2650Kb)  |  收藏  |  浏览/下载：96/0  |  提交时间：2023/02/24
deep genome skimming  Hyb-Seq  mitochondrial genes  nuclear ribosomal DNA  single-copy nuclear genes  Vitaceae  
Major clades and a revised classification of Magnolia and Magnoliaceae based on whole plastid genome sequences via genome skimming 期刊论文
JOURNAL OF SYSTEMATICS AND EVOLUTION, 2020, 卷号: 58, 期号: 5, 页码: 673-695
作者:  Wang, Yu-Bing;  Liu, Bin-Bin;  Nie, Ze-Long;  Chen, Hong-Feng;  Chen, Fa-Ju;  Figlar, Richard B.;  Wen, Jun
Adobe PDF(20587Kb)  |  收藏  |  浏览/下载：107/0  |  提交时间：2022/03/01
classification  genome skimming  Magnolia  Magnoliaceae  plastome  taxonomy  
A supermatrix approach provides a comprehensive genus-level phylogeny for Gentianales 期刊论文
JOURNAL OF SYSTEMATICS AND EVOLUTION, 2016, 卷号: 54, 期号: 4, 页码: 400-415
作者:  Yang, Lei-Lei;  Li, Hong-Lei;  Wei, Lei;  Yang, Tuo;  Kuang, Dai-Yong;  Li, Ming-Hong;  Liao, Yi-Ying;  Chen, Zhi-Duan;  Wu, Hong;  Zhang, Shou-Zhou
Adobe PDF(728Kb)  |  收藏  |  浏览/下载：99/0  |  提交时间：2022/07/08
Gentianales  maximum likelihood  phylogeny  supermatrix approach  
Accelerated evolution of early angiosperms: Evidence from ranunculalean phylogeny by integrating living and fossil data 期刊论文
JOURNAL OF SYSTEMATICS AND EVOLUTION, 2016, 卷号: 54, 期号: 4, 页码: 336-341
作者:  Wang, Wei;  Dilcher, David L.;  Sun, Ge;  Wang, Hong-Shan;  Chen, Zhi-Duan
Adobe PDF(303Kb)  |  收藏  |  浏览/下载：102/0  |  提交时间：2022/07/08
angiosperms  Cretaceous  diversification  paleobotany  phylogeny  Ranunculales  
Global versus Chinese perspectives on the phylogeny of the N-fixing clade 期刊论文
JOURNAL OF SYSTEMATICS AND EVOLUTION, 2016, 卷号: 54, 期号: 4, 页码: 392-399
作者:  Li, Hong-Lei;  Wang, Wei;  Li, Rui-Qi;  Zhang, Jing-Bo;  Sun, Miao;  Naeem, Rehan;  Su, Jun-Xia;  Xiang, Xiao-Guo;  Mortimer, Peter E.;  Li, De-Zhu;  Hyde, Kevin D.;  Xu, Jian-Chu;  Soltis, Douglas E.;  Soltis, Pamela S.;  Li, Jianhua;  Zhang, Shou-Zhou;  Wu, Hong;  Chen, Zhi-Duan;  Lu, An-Ming
Adobe PDF(142Kb)  |  收藏  |  浏览/下载：118/0  |  提交时间：2022/07/08
global tree of life  N-fixing clade  phylogeny  regional tree of life  supermatrix  
Tree of life for the genera of Chinese vascular plants 期刊论文
JOURNAL OF SYSTEMATICS AND EVOLUTION, 2016, 卷号: 54, 期号: 4, 页码: 277-306
作者:  Chen, Zhi-Duan;  Yang, Tuo;  Lin, Li;  Lu, Li-Min;  Li, Hong-Lei;  Sun, Miao;  Liu, Bing;  Chen, Min;  Niu, Yan-Ting;  Ye, Jian-Fei;  Cao, Zhi-Yong;  Liu, Hong-Mei;  Wang, Xiao-Ming;  Wang, Wei;  Zhang, Jing-Bo;  Meng, Zhen;  Cao, Wei;  Li, Jian-Hui;  Wu, Sheng-Dan;  Zhao, Hui-Ling;  Liu, Zhong-Jian;  Du, Zhi-Yuan;  Wang, Qing-Feng;  Guo, Jing;  Tan, Xin-Xin;  Su, Jun-Xia;  Zhang, Lin-Jing;  Yang, Lei-Lei;  Liao, Yi-Ying;  Li, Ming-He;  Zhang, Guo-Qiang;  Chung, Shih-Wen;  Zhang, Jian;  Xiang, Kun-Li;  Li, Rui-Qi;  Soltis, Douglas E.;  Soltis, Pamela S.;  Zhou, Shi-Liang;  Ran, Jin-Hua;  Wang, Xiao-Quan;  Jin, Xiao-Hua;  Chen, You-Sheng;  Gao, Tian-Gang;  Li, Jian-Hua;  Zhang, Shou-Zhou;  Lu, An-Ming
Adobe PDF(2587Kb)  |  收藏  |  浏览/下载：145/0  |  提交时间：2022/07/08
China  DarwinTree  megaphylogeny  regional tree of life  SoTree  vascular plants  
The Tree of Life: China project 期刊论文
JOURNAL OF SYSTEMATICS AND EVOLUTION, 2016, 卷号: 54, 期号: 4, 页码: CP5-276
作者:  Chen, Zhi-Duan;  Lu, An-Ming;  Zhang, Shou-Zhou;  Wang, Qing-Feng;  Liu, Zhong-Jian;  Li, De-Zhu;  Ma, Hong;  Li, Jian-Hua;  Soltis, Douglas E.;  Soltis, Pamela S.;  Wen, Jun
Adobe PDF(107Kb)  |  收藏  |  浏览/下载：118/0  |  提交时间：2022/07/08