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Species delimitation of the liquorice tribe (Leguminosae: Glycyrrhizeae) based on phylogenomic and machine learning analyses 期刊论文
JOURNAL OF SYSTEMATICS AND EVOLUTION, 2023, 卷号: 61, 期号: 1, 页码: 22-41
作者:  Duan, Lei;  Han, Li-Na;  Liu, Bin-Bin;  Leostrin, Artem;  Harris, A. J.;  Wang, Lin;  Arslan, Emine;  Ertugrul, Kuddisi;  Knyazev, Mikhail;  Hantemirova, Elena;  Wen, Jun;  Chen, Hong-Feng
Adobe PDF(1597Kb)  |  收藏  |  浏览/下载：105/0  |  提交时间：2024/03/07
character evolution  Glycyrrhiza  machine learning analysis  medicinal group  phylogenomics  species delimitation  
Fire-prone Rhamnaceae with South African affinities in Cretaceous Myanmar amber 期刊论文
NATURE PLANTS, 2022, 卷号: 8, 期号: 2, 页码: 125-135
作者:  Shi, Chao;  Wang, Shuo;  Cai, Hao-Hong;  Zhang, Hong-Rui;  Long, Xiao-Xuan;  Tihelka, Erik;  Song, Wei-cai;  Feng, Qi;  Jiang, Ri-xin;  Cai, Chen-Yang;  Lombard, Natasha;  Li, Xiong;  Yuan, Ji;  Zhu, Jian-ping;  Yang, Hui-yu;  Liu, Xiao-fan;  Xiang, Qiao-ping;  Zhao, Zun-tian;  Long, Chun-lin;  Schneider, Harald;  Zhang, Xian-chun;  Peng, Hua;  Li, De-Zhu;  Fan, Yong;  Engel, Michael S.;  Wang, Yong-Dong;  Spicer, Robert A.
Adobe PDF(3877Kb)  |  收藏  |  浏览/下载：39/0  |  提交时间：2024/03/07
Genomic basis of the giga-chromosomes and giga-genome of tree peony Paeonia ostii 期刊论文
NATURE COMMUNICATIONS, 2022, 卷号: 13, 期号: 1
作者:  Yuan, Junhui;  Jiang, Sanjie;  Jian, Jianbo;  Liu, Mingyu;  Yue, Zhen;  Xu, Jiabao;  Li, Juan;  Xu, Chunyan;  Lin, Lihong;  Jing, Yi;  Zhang, Xiaoxiao;  Chen, Haixin;  Zhang, Linjuan;  Fu, Tao;  Yu, Shuiyan;  Wu, Zhangyan;  Zhang, Ying;  Wang, Chongzhi;  Zhang, Xiao;  Huang, Liangbo;  Wang, Hongqi;  Hong, Deyuan;  Chen, Xiao-Ya;  Hu, Yonghong
Adobe PDF(3366Kb)  |  收藏  |  浏览/下载：45/0  |  提交时间：2024/03/07
Genome size evolution of the extant lycophytes and ferns 期刊论文
PLANT DIVERSITY, 2022, 卷号: 44, 期号: 2, 页码: 141-152
作者:  Wang, Fa-Guo;  Wang, Ai-Hua;  Bai, Cheng-Ke;  Jin, Dong-Mei;  Nie, Li-Yun;  Harris, A. J.;  Che, Le;  Wang, Juan-Juan;  Li, Shi-Yu;  Xu, Lei;  Shen, Hui;  Gu, Yu-Feng;  Shang, Hui;  Duan, Lei;  Zhang, Xian-Chun;  Chen, Hong-Feng;  Yan, Yue-Hong
Adobe PDF(2515Kb)  |  收藏  |  浏览/下载：46/0  |  提交时间：2024/03/07
Genome size  Ferns  Chromosome numbers  Habitat type  Whole-genome duplications  Evolution  
Mitochondrial genes from 18 angiosperms fill sampling gaps for phylogenomic inferences of the early diversification of flowering plants 期刊论文
JOURNAL OF SYSTEMATICS AND EVOLUTION, 2022, 卷号: 60, 期号: 4, 页码: 773-788
作者:  Xue, Jia-Yu;  Dong, Shan-Shan;  Wang, Ming-Qiang;  Song, Tian-Qiang;  Zhou, Guang-Can;  Li, Zhen;  Van de Peer, Yves;  Shao, Zhu-Qing;  Wang, Wei;  Chen, Min;  Zhang, Yan-Mei;  Sun, Xiao-Qin;  Chen, Hong-Feng;  Zhang, Yong-Xia;  Zhang, Shou-Zhou;  Chen, Fei;  Zhang, Liang-Sheng;  Cox, Cymon;  Liu, Yang;  Wang, Qiang;  Hang, Yue-Yu
Adobe PDF(1723Kb)  |  收藏  |  浏览/下载：39/0  |  提交时间：2024/03/07
early angiosperm radiation  incongruence  mitochondrial genome  phylogenomics  systematic error  
A well-supported nuclear phylogeny of Poaceae and implications for the evolution of C4 photosynthesis 期刊论文
MOLECULAR PLANT, 2022, 卷号: 15, 期号: 4, 页码: 755-777
作者:  Huang, Weichen;  Zhang, Lin;  Columbus, J. Travis;  Hu, Yi;  Zhao, Yiyong;  Tang, Lin;  Guo, Zhenhua;  Chen, Wenli;  McKain, Michael;  Bartlett, Madelaine;  Huang, Chien-Hsun;  Li, De-Zhu;  Ge, Song;  Ma, Hong
Adobe PDF(3240Kb)  |  收藏  |  浏览/下载：48/0  |  提交时间：2024/03/07
Gramineae  transcriptome  nuclear phylogeny  molecular clock  C4 photosynthesis  ppc gene evolution  
Chromosome-level and haplotype-resolved genome provides insight into the tetraploid hybrid origin of patchouli 期刊论文
NATURE COMMUNICATIONS, 2022, 卷号: 13, 期号: 1
作者:  Shen, Yanting;  Li, Wanying;  Zeng, Ying;  Li, Zhipeng;  Chen, Yiqiong;  Zhang, Jixiang;  Zhao, Hong;  Feng, Lingfang;  Ma, Dongming;  Mo, Xiaolu;  Ouyang, Puyue;  Huang, Lili;  Wang, Zheng;  Jiao, Yuannian;  Wang, Hong-bin
Adobe PDF(2683Kb)  |  收藏  |  浏览/下载：58/0  |  提交时间：2024/03/07
Phylogenomic conflict analyses in the apple genus Malus s.l. reveal widespread hybridization and allopolyploidy driving diversification, with insights into the complex biogeographic history in the Northern Hemisphere 期刊论文
JOURNAL OF INTEGRATIVE PLANT BIOLOGY, 2022, 卷号: 64, 期号: 5, 页码: 1020-1043
作者:  Liu, Bin-Bin;  Ren, Chen;  Kwak, Myounghai;  Hodel, Richard G. J.;  Xu, Chao;  He, Jian;  Zhou, Wen-Bin;  Huang, Chien-Hsun;  Ma, Hong;  Qian, Guan-Ze;  Hong, De-Yuan;  Wen, Jun
Adobe PDF(3053Kb)  |  收藏  |  浏览/下载：43/0  |  提交时间：2024/03/07
deep genome skimming  genomic discordance  historical biogeography  massive extinction  reticulate evolution  single-copy nuclear genes  
Genomes of leafy and leafless Platanthera orchids illuminate the evolution of mycoheterotrophy 期刊论文
NATURE PLANTS, 2022, 卷号: 8, 期号: 4, 页码: 373+
作者:  Li, Ming-He;  Liu, Ke-Wei;  Li, Zhen;  Lu, Hsiang-Chia;  Ye, Qin-Liang;  Zhang, Diyang;  Wang, Jie-Yu;  Li, Yu-Feng;  Zhong, Zhi-Ming;  Liu, Xuedie;  Yu, Xia;  Liu, Ding-Kun;  Tu, Xiong-De;  Liu, Bin;  Hao, Yang;  Liao, Xing-Yu;  Jiang, Yu-Ting;  Sun, Wei-Hong;  Chen, Jinliao;  Chen, Yan-Qiong;  Ai, Ye;  Zhai, Jun-Wen;  Wu, Sha-Sha;  Zhou, Zhuang;  Hsiao, Yu-Yun;  Wu, Wan-Lin;  Chen, You-Yi;  Lin, Yu-Fu;  Hsu, Jui-Ling;  Li, Chia-Ying;  Wang, Zhi-Wen;  Zhao, Xiang;  Zhong, Wen-Ying;  Ma, Xiao-Kai;  Ma, Liang;  Huang, Jie;  Chen, Gui-Zhen;  Huang, Ming-Zhong;  Huang, Laiqiang;  Peng, Dong-Hui;  Luo, Yi-Bo;  Zou, Shuang-Quan;  Chen, Shi-Pin;  Lan, Siren;  Tsai, Wen-Chieh;  van de Peer, Yves;  Liu, Zhong-Jian
Adobe PDF(8532Kb)  |  收藏  |  浏览/下载：44/0  |  提交时间：2024/03/07
Loss of innovative traits underlies multiple origins of Aquilegia ecalcarata 期刊论文
JOURNAL OF SYSTEMATICS AND EVOLUTION, 2022, 卷号: 60, 期号: 6, 页码: 1291-1302
作者:  Geng, Fang-Dong;  Xie, Jing-He;  Xue, Cheng;  Sun, Li;  Li, Jiao-Jie;  Niu, Chen-Yu;  Huang, Lei;  Zhang, Xiao-Hui;  Kang, Ju-Qing;  Kong, Hong-Zhi;  Ren, Yi;  Zhang, Jian-Qiang
Adobe PDF(3573Kb)  |  收藏  |  浏览/下载：36/0  |  提交时间：2024/03/07
Aquilegia  divergence  ecalcarata  gene introgression  parallel origion  Spurless