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Phylogenomic conflict analyses in the apple genus Malus s.l. reveal widespread hybridization and allopolyploidy driving diversification, with insights into the complex biogeographic history in the Northern Hemisphere 期刊论文
JOURNAL OF INTEGRATIVE PLANT BIOLOGY, 2022, 卷号: 64, 期号: 5, 页码: 1020-1043
作者:  Liu, Bin-Bin;  Ren, Chen;  Kwak, Myounghai;  Hodel, Richard G. J.;  Xu, Chao;  He, Jian;  Zhou, Wen-Bin;  Huang, Chien-Hsun;  Ma, Hong;  Qian, Guan-Ze;  Hong, De-Yuan;  Wen, Jun
Adobe PDF(3053Kb)  |  收藏  |  浏览/下载：15/0  |  提交时间：2024/03/07
deep genome skimming  genomic discordance  historical biogeography  massive extinction  reticulate evolution  single-copy nuclear genes  
Phylogenomics and biogeography of Catalpa (Bignoniaceae) reveal incomplete lineage sorting and three dispersal events 期刊论文
MOLECULAR PHYLOGENETICS AND EVOLUTION, 2022, 卷号: 166
作者:  Dong, Wenpan;  Liu, Yanlei;  Li, Enze;  Xu, Chao;  Sun, Jiahui;  Li, Wenying;  Zhou, Shiliang;  Zhang, Zhixiang;  Suo, Zhili
Adobe PDF(2844Kb)  |  收藏  |  浏览/下载：7/0  |  提交时间：2024/03/07
Biogeography  Catalpa  Dispersal  Incomplete lineage sorting  Interspecific gene flow  Phylogenomics  
Phylogenomic relationships and species identification of the olive genus Olea (Oleaceae) 期刊论文
JOURNAL OF SYSTEMATICS AND EVOLUTION, 2022, 卷号: 60, 期号: 6, 页码: 1263-1280
作者:  Dong, Wen-Pan;  Sun, Jia-Hui;  Liu, Yan-Lei;  Xu, Chao;  Wang, Yi-Heng;  Suo, Zhi-Li;  Zhou, Shi-Liang;  Zhang, Zhi-Xiang;  Wen, Jun
Adobe PDF(2070Kb)  |  收藏  |  浏览/下载：10/0  |  提交时间：2024/03/07
Olea  phylogenomics  specific DNA barcode  species identification  super-barcode  
Determination of a criminal suspect using environmental plant DNA metabarcoding technology 期刊论文
FORENSIC SCIENCE INTERNATIONAL, 2021, 卷号: 324
作者:  Liu, Yanlei;  Xu, Chao;  Dong, Wenpan;  Yang, Xueying;  Zhou, Shiliang
Adobe PDF(3890Kb)  |  收藏  |  浏览/下载：66/0  |  提交时间：2023/02/24
DNA barcoding  Forensics  DNA metabarcoding  Environmental plant DNA  
Out of the Pan-Himalaya: Evolutionary history of the Paeoniaceae revealed by phylogenomics 期刊论文
JOURNAL OF SYSTEMATICS AND EVOLUTION, 2021, 卷号: 59, 期号: 6, 页码: 1170-1182
作者:  Zhou, Shi-Liang;  Xu, Chao;  Liu, Jing;  Yu, Yan;  Wu, Ping;  Cheng, Tao;  Hong, De-Yuan
Adobe PDF(1288Kb)  |  收藏  |  浏览/下载：66/0  |  提交时间：2023/02/24
biogeography  molecular dating  Paeonia  phylogeny  reticulate evolution  
NOVOWrap: An automated solution for plastid genome assembly and structure standardization 期刊论文
MOLECULAR ECOLOGY RESOURCES, 2021, 卷号: 21, 期号: 6, 页码: 2177-2186
作者:  Wu, Ping;  Chen, Hao;  Xu, Chao;  Yang, Jie;  Zhang, Xian Chun;  Zhou, Shi Liang
Adobe PDF(924Kb)  |  收藏  |  浏览/下载：70/1  |  提交时间：2023/02/24
assembly  plastid genome  standardized structure  
Chloroplast phylogenomic insights into the evolution of Distylium (Hamamelidaceae) 期刊论文
BMC GENOMICS, 2021, 卷号: 22, 期号: 1
作者:  Dong, Wenpan;  Liu, Yanlei;  Xu, Chao;  Gao, Yongwei;  Yuan, Qingjun;  Suo, Zhili;  Zhang, Zhixiang;  Sun, Jiahui
Adobe PDF(1731Kb)  |  收藏  |  浏览/下载：96/0  |  提交时间：2023/02/24
Distylium  Hamamelidaceae  Species identification  cpDNA marker  Phylogenomics  
Chloroplast phylogenomics and divergence times of Lagerstroemia (Lythraceae) 期刊论文
BMC GENOMICS, 2021, 卷号: 22, 期号: 1
作者:  Dong, Wenpan;  Xu, Chao;  Liu, Yanlei;  Shi, Jipu;  Li, Wenying;  Suo, Zhili
Adobe PDF(1707Kb)  |  收藏  |  浏览/下载：66/0  |  提交时间：2023/02/24
Lagerstroemia  Chloroplast genome  Phylogeny  Divergence time  
Evolutionary and phylogenetic aspects of the chloroplast genome of Chaenomeles species 期刊论文
SCIENTIFIC REPORTS, 2020, 卷号: 10, 期号: 1
作者:  Sun, Jiahui;  Wang, Yiheng;  Liu, Yanlei;  Xu, Chao;  Yuan, Qingjun;  Guo, Lanping;  Huang, Luqi
Adobe PDF(5382Kb)  |  收藏  |  浏览/下载：98/0  |  提交时间：2022/03/01
The complete chloroplast genome sequence ofMalus toringo(Rosaceae) 期刊论文
MITOCHONDRIAL DNA PART B-RESOURCES, 2020, 卷号: 5, 期号: 3, 页码: 2832-2833
作者:  Li, Yanan;  Liu, Yanlei;  Xu, Chao;  Li, Fengyi;  Wang, Ling;  Zhou, Shiliang
Adobe PDF(927Kb)  |  收藏  |  浏览/下载：97/0  |  提交时间：2022/03/01
Malus toringo  complete chloroplast genome  medicinal value  phylogenetic relationships