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A revised subfamilial classification of Polypodiaceae based on plastome, nuclear ribosomal, and morphological evidence 期刊论文
TAXON, 2022, 卷号: 71, 期号: 2, 页码: 288-306
作者:  Wei, Ran;  Zhang, Xian-Chun
Adobe PDF(2147Kb)  |  收藏  |  浏览/下载：12/0  |  提交时间：2024/03/07
genome skimming  nuclear ribosomal cistron  plastid genome  phylogenetic classification  polygrammoids  subfamily  
Phylogeny and evolution of Cupressaceae: Updates on intergeneric relationships and new insights on ancient intergeneric hybridization 期刊论文
MOLECULAR PHYLOGENETICS AND EVOLUTION, 2022, 卷号: 177
作者:  Liu, Xin-Quan;  Xia, Xiao-Mei;  Chen, Luo;  Wang, Xiao-Quan
Adobe PDF(4155Kb)  |  收藏  |  浏览/下载：15/0  |  提交时间：2024/03/07
Phylogenomics  Biogeography  Reticulate evolution  Ancient hybridization  Cupressaceae  Conifer  
Phylogenomic conflict analyses in the apple genus Malus s.l. reveal widespread hybridization and allopolyploidy driving diversification, with insights into the complex biogeographic history in the Northern Hemisphere 期刊论文
JOURNAL OF INTEGRATIVE PLANT BIOLOGY, 2022, 卷号: 64, 期号: 5, 页码: 1020-1043
作者:  Liu, Bin-Bin;  Ren, Chen;  Kwak, Myounghai;  Hodel, Richard G. J.;  Xu, Chao;  He, Jian;  Zhou, Wen-Bin;  Huang, Chien-Hsun;  Ma, Hong;  Qian, Guan-Ze;  Hong, De-Yuan;  Wen, Jun
Adobe PDF(3053Kb)  |  收藏  |  浏览/下载：14/0  |  提交时间：2024/03/07
deep genome skimming  genomic discordance  historical biogeography  massive extinction  reticulate evolution  single-copy nuclear genes  
Paleopolyploidies and Genomic Fractionation in Major Eudicot Clades 期刊论文
FRONTIERS IN PLANT SCIENCE, 2022, 卷号: 13
作者:  Teng, Jia;  Wang, Jianyu;  Zhang, Lan;  Wei, Chendan;  Shen, Shaoqi;  Xiao, Qimeng;  Yue, Yuanshuai;  Hao, Yanan;  Ge, Weina;  Wang, Jinpeng
Adobe PDF(3270Kb)  |  收藏  |  浏览/下载：15/0  |  提交时间：2024/03/07
Aquilegia coerulea  Nelumbo nucifera  Vitis vinifera  hierarchical alignment  gene colinearity  polyploidization  
Phylogenomic approaches untangle early divergences and complex diversifications of the olive plant family 期刊论文
BMC BIOLOGY, 2022, 卷号: 20, 期号: 1
作者:  Dong, Wenpan;  Li, Enze;  Liu, Yanlei;  Xu, Chao;  Wang, Yushuang;  Liu, Kangjia;  Cui, Xingyong;  Sun, Jiahui;  Suo, Zhili;  Zhang, Zhixiang;  Wen, Jun;  Zhou, Shiliang
Adobe PDF(4457Kb)  |  收藏  |  浏览/下载：13/0  |  提交时间：2024/03/07
Ancient introgression  Gene tree conflict  Incomplete lineage sorting  Oleaceae  Phylogenomics  Rate heterogeneity  
Potential allopolyploid origin of Ericales revealed with gene-tree reconciliation 期刊论文
FRONTIERS IN PLANT SCIENCE, 2022, 卷号: 13
作者:  Nie, Shuai;  Tian, Xue-Chan;  Kong, Lei;  Zhao, Shi-Wei;  Chen, Zhao-Yang;  Jiao, Si-Qian;  El-Kassaby, Yousry A.;  Porth, Ilga;  Yang, Fu-Sheng;  Zhao, Wei;  Mao, Jian-Feng
Adobe PDF(6979Kb)  |  收藏  |  浏览/下载：9/0  |  提交时间：2024/03/07
Ericales  allopolyploidization  whole genome duplication  gene loss  hybridization  
Synthesis of Nuclear and Chloroplast Data Combined With Network Analyses Supports the Polyploid Origin of the Apple Tribe and the Hybrid Origin of the Maleae-Gillenieae Clade 期刊论文
FRONTIERS IN PLANT SCIENCE, 2022, 卷号: 12
作者:  Hodel, Richard G. J.;  Zimmer, Elizabeth A.;  Liu, Bin-Bin;  Wen, Jun
Adobe PDF(3910Kb)  |  收藏  |  浏览/下载：11/0  |  提交时间：2024/03/07
allopolyploidy  ancient hybridization  cytonuclear conflict  genome doubling  phylogenetic networks  phylogenomics  reticulate evolution  
Phylogenetic relationships and chloroplast capture in the Amelanchier-Malacomeles-Peraphyllum clade (Maleae, Rosaceae): Evidence from chloroplast genome and nuclear ribosomal DNA data using genome skimming 期刊论文
MOLECULAR PHYLOGENETICS AND EVOLUTION, 2020, 卷号: 147
作者:  Liu, Bin-Bin;  Campbell, Christopher S.;  Hong, De-Yuan;  Wen, Jun
Adobe PDF(2972Kb)  |  收藏  |  浏览/下载：93/0  |  提交时间：2022/03/01
Chloroplast capture  Hybridization  Maleae  Nuclear ribosomal DNA  Plastome  Rosaceae  
New infrageneric classification of Abies in light of molecular phylogeny and high diversity in western North America 期刊论文
JOURNAL OF SYSTEMATICS AND EVOLUTION, 2018, 卷号: 56, 期号: 5, 页码: 562-572
作者:  Xiang, Qiao-Ping;  Wei, Ran;  Zhu, Yan-Mei;  Harris, A. J.;  Zhang, Xian-Chun
Adobe PDF(905Kb)  |  收藏  |  浏览/下载：86/0  |  提交时间：2022/02/25
California floristic province  chloroplast gene  fir tree  infrageneric taxonomic revision  monophyly  nuclear single copy gene  
Multilocus species tree analyses resolve the ancient radiation of the subtribe Zizaniinae (Poaceae) 期刊论文
MOLECULAR PHYLOGENETICS AND EVOLUTION, 2015, 卷号: 84, 页码: 232-239
作者:  Tang, Liang;  Zou, Xin-hui;  Zhang, Lin-bin;  Ge, Song
Adobe PDF(1289Kb)  |  收藏  |  浏览/下载：63/0  |  提交时间：2022/09/13
Ancient rapid radiation  Incomplete lineage sorting  Multilocus data  Species tree  Zizaniinae