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Phylogenomic conflict analyses in the apple genus Malus s.l. reveal widespread hybridization and allopolyploidy driving diversification, with insights into the complex biogeographic history in the Northern Hemisphere 期刊论文
JOURNAL OF INTEGRATIVE PLANT BIOLOGY, 2022, 卷号: 64, 期号: 5, 页码: 1020-1043
作者:  Liu, Bin-Bin;  Ren, Chen;  Kwak, Myounghai;  Hodel, Richard G. J.;  Xu, Chao;  He, Jian;  Zhou, Wen-Bin;  Huang, Chien-Hsun;  Ma, Hong;  Qian, Guan-Ze;  Hong, De-Yuan;  Wen, Jun
Adobe PDF(3053Kb)  |  收藏  |  浏览/下载：14/0  |  提交时间：2024/03/07
deep genome skimming  genomic discordance  historical biogeography  massive extinction  reticulate evolution  single-copy nuclear genes  
Organization, Phylogenetic Marker Exploitation, and Gene Evolution in the Plastome of Thalictrum (Ranunculaceae) 期刊论文
FRONTIERS IN PLANT SCIENCE, 2022, 卷号: 13
作者:  Xiang, Kun-Li;  Mao, Wei;  Peng, Huan-Wen;  Erst, Andrey S.;  Yang, Ying-Xue;  He, Wen-Chuang;  Wu, Zhi-Qiang
Adobe PDF(3174Kb)  |  收藏  |  浏览/下载：11/0  |  提交时间：2024/03/07
Thalictrum  plastid genome  genome structure  molecular markers  phylogeny  
Phylogenomics and biogeography of Catalpa (Bignoniaceae) reveal incomplete lineage sorting and three dispersal events 期刊论文
MOLECULAR PHYLOGENETICS AND EVOLUTION, 2022, 卷号: 166
作者:  Dong, Wenpan;  Liu, Yanlei;  Li, Enze;  Xu, Chao;  Sun, Jiahui;  Li, Wenying;  Zhou, Shiliang;  Zhang, Zhixiang;  Suo, Zhili
Adobe PDF(2844Kb)  |  收藏  |  浏览/下载：7/0  |  提交时间：2024/03/07
Biogeography  Catalpa  Dispersal  Incomplete lineage sorting  Interspecific gene flow  Phylogenomics  
On the Species Delimitation of the Maddenia Group of Prunus (Rosaceae): Evidence From Plastome and Nuclear Sequences and Morphology 期刊论文
FRONTIERS IN PLANT SCIENCE, 2021, 卷号: 12
作者:  Su, Na;  Liu, Bin-bin;  Wang, Jun-ru;  Tong, Ru-chang;  Ren, Chen;  Chang, Zhao-yang;  Zhao, Liang;  Potter, Daniel;  Wen, Jun
Adobe PDF(6786Kb)  |  收藏  |  浏览/下载：78/0  |  提交时间：2023/02/24
Maddenia  Prunus  Rosaceae  barcoding  chloroplast genome  single-copy nuclear genes  species delimitation  
The origin of allotetraploid Lepisorus inaequibasis (Polypodiaceae) and paternal bias in its morphology and abiotic niche 期刊论文
TAXON, 2020, 卷号: 69, 期号: 1, 页码: 43-55
作者:  Zhao, Cun-Feng;  Wei, Ran;  Xiang, Qiao-Ping;  Zhang, Xian-Chun
Adobe PDF(7102Kb)  |  收藏  |  浏览/下载：103/0  |  提交时间：2022/03/01
hybrid origin  paternal preference  polyploid  reticulate evolution  
Distinctive evolutionary pattern of organelle genomes linked to the nuclear genome in Selaginellaceae 期刊论文
PLANT JOURNAL, 2020, 卷号: 104, 期号: 6, 页码: 1657-1672
作者:  Kang, Jong-Soo;  Zhang, Hong-Rui;  Wang, Ya-Rong;  Liang, Si-Qi;  Mao, Zhi-Yuan;  Zhang, Xian-Chun;  Xiang, Qiao-Ping
Adobe PDF(1546Kb)  |  收藏  |  浏览/下载：121/0  |  提交时间：2022/03/01
Selaginella  plastid genome  mitochondrial genome  genome evolution  convergent evolution  RecA  
New infrageneric classification of Abies in light of molecular phylogeny and high diversity in western North America 期刊论文
JOURNAL OF SYSTEMATICS AND EVOLUTION, 2018, 卷号: 56, 期号: 5, 页码: 562-572
作者:  Xiang, Qiao-Ping;  Wei, Ran;  Zhu, Yan-Mei;  Harris, A. J.;  Zhang, Xian-Chun
Adobe PDF(905Kb)  |  收藏  |  浏览/下载：86/0  |  提交时间：2022/02/25
California floristic province  chloroplast gene  fir tree  infrageneric taxonomic revision  monophyly  nuclear single copy gene  
Resolving interspecific relationships within evolutionarily young lineages using RNA-seq data: An example from Pedicularis section Cyathophora (Orobanchaceae) 期刊论文
MOLECULAR PHYLOGENETICS AND EVOLUTION, 2017, 卷号: 107, 页码: 345-355
作者:  Wang, Hong-Juan;  Li, Wei-Tao;  Liu, Ya-Nan;  Yang, Fu-Sheng;  Wang, Xiao-Quan
Adobe PDF(1607Kb)  |  收藏  |  浏览/下载：101/0  |  提交时间：2022/03/28
Non-neutral gene  Phylogenomics  Phylogeny  Recent radiation  Selective pressure  Transcriptome  
Phylogeny, historical biogeography and characters evolution of the drought resistant fern Pyrrosia Mirbel (Polypodiaceae) inferred from plastid and nuclear markers 期刊论文
SCIENTIFIC REPORTS, 2017, 卷号: 7
作者:  Wei, Xueping;  Qi, Yaodong;  Zhang, Xianchun;  Luo, Li;  Shang, Hui;  Wei, Ran;  Liu, Haitao;  Zhang, Bengang
Adobe PDF(790Kb)  |  收藏  |  浏览/下载：81/0  |  提交时间：2022/03/28
Phylogenetic Resolution in Juglans Based on Complete Chloroplast Genomes and Nuclear DNA Sequences 期刊论文
FRONTIERS IN PLANT SCIENCE, 2017, 卷号: 8
作者:  Dong, Wenpan;  Xu, Chao;  Li, Wenqing;  Xie, Xiaoman;  Lu, Yizeng;  Liu, Yanlei;  Jin, Xiaobai;  Suo, Zhili
Adobe PDF(1621Kb)  |  收藏  |  浏览/下载：77/0  |  提交时间：2022/03/28
Juglans  complete chloroplast genome  small inversion  internal transcribed spacer  ubiquitin ligase gene  phylogeny