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Genomes shed light on the evolution of Begonia, a mega-diverse genus 期刊论文
NEW PHYTOLOGIST, 2022, 卷号: 234, 期号: 1, 页码: 295-310
作者:  Li, Lingfei;  Chen, Xiaoli;  Fang, Dongming;  Dong, Shanshan;  Guo, Xing;  Li, Na;  Campos-Dominguez, Lucia;  Wang, Wenguang;  Liu, Yang;  Lang, Xiaoan;  Peng, Yang;  Tian, Daike;  Thomas, Daniel C.;  Mu, Weixue;  Liu, Min;  Wu, Chenyu;  Yang, Ting;  Zhang, Suzhou;  Yang, Leilei;  Yang, Jianfen;  Liu, Zhong-Jian;  Zhang, Liangsheng;  Zhang, Xingtan;  Chen, Fei;  Jiao, Yuannian;  Guo, Yalong;  Hughes, Mark;  Wang, Wei;  Liu, Xiaofei;  Zhong, Chunmei;  Li, Airong;  Sahu, Sunil Kumar;  Yang, Huanming;  Wu, Ernest;  Sharbrough, Joel;  Lisby, Michael;  Liu, Xin;  Xu, Xun;  Soltis, Douglas E.;  Van de Peer, Yves;  Kidner, Catherine;  Zhang, Shouzhou;  Liu, Huan
Adobe PDF(3399Kb)  |  收藏  |  浏览/下载：13/0  |  提交时间：2024/03/07
Begonia  evolution  genomes  introgression  shade adaptation  whole-genome duplication  
Mitochondrial genes from 18 angiosperms fill sampling gaps for phylogenomic inferences of the early diversification of flowering plants 期刊论文
JOURNAL OF SYSTEMATICS AND EVOLUTION, 2022, 卷号: 60, 期号: 4, 页码: 773-788
作者:  Xue, Jia-Yu;  Dong, Shan-Shan;  Wang, Ming-Qiang;  Song, Tian-Qiang;  Zhou, Guang-Can;  Li, Zhen;  Van de Peer, Yves;  Shao, Zhu-Qing;  Wang, Wei;  Chen, Min;  Zhang, Yan-Mei;  Sun, Xiao-Qin;  Chen, Hong-Feng;  Zhang, Yong-Xia;  Zhang, Shou-Zhou;  Chen, Fei;  Zhang, Liang-Sheng;  Cox, Cymon;  Liu, Yang;  Wang, Qiang;  Hang, Yue-Yu
Adobe PDF(1723Kb)  |  收藏  |  浏览/下载：11/0  |  提交时间：2024/03/07
early angiosperm radiation  incongruence  mitochondrial genome  phylogenomics  systematic error  
Plastid and nuclear phylogenomic incongruences and biogeographic implications of Magnolia s.l. (Magnoliaceae) 期刊论文
JOURNAL OF SYSTEMATICS AND EVOLUTION, 2022, 卷号: 60, 期号: 1, 页码: 1-15
作者:  Dong, Shan-Shan;  Wang, Ya-Ling;  Xia, Nian-He;  Liu, Yang;  Liu, Min;  Lian, Lian;  Li, Na;  Li, Ling-Fei;  Lang, Xiao-An;  Gong, Yi-Qing;  Chen, Lu;  Wu, Ernest;  Zhang, Shou-Zhou
Adobe PDF(2059Kb)  |  收藏  |  浏览/下载：17/0  |  提交时间：2024/03/07
biogeography  hybridization  Magnoliaceae  phylogenomics  plastid  
Diversity, phylogeny, and adaptation of bryophytes: insights from genomic and transcriptomic data 期刊论文
JOURNAL OF EXPERIMENTAL BOTANY, 2022, 卷号: 73, 期号: 13, 页码: 4306-4322
作者:  Wang, Qing-Hua;  Zhang, Jian;  Liu, Yang;  Jia, Yu;  Jiao, Yuan-Nian;  Xu, Bo;  Chen, Zhi-Duan
Adobe PDF(4396Kb)  |  收藏  |  浏览/下载：12/0  |  提交时间：2024/03/07
Adaptation  genome  hornworts  liverworts  mosses  plant terrestrialization  transcriptome  
The Cycas genome and the early evolution of seed plants 期刊论文
NATURE PLANTS, 2022, 卷号: 8, 期号: 4, 页码: 389+
作者:  Liu, Yang;  Wang, Sibo;  Li, Linzhou;  Yang, Ting;  Dong, Shanshan;  Wei, Tong;  Wu, Shengdan;  Liu, Yongbo;  Gong, Yiqing;  Feng, Xiuyan;  Ma, Jianchao;  Chang, Guanxiao;  Huang, Jinling;  Yang, Yong;  Wang, Hongli;  Liu, Min;  Xu, Yan;  Liang, Hongping;  Yu, Jin;  Cai, Yuqing;  Zhang, Zhaowu;  Fan, Yannan;  Mu, Weixue;  Sahu, Sunil Kumar;  Liu, Shuchun;  Lang, Xiaoan;  Yang, Leilei;  Li, Na;  Habib, Sadaf;  Yang, Yongqiong;  Lindstrom, Anders J.;  Liang, Pei;  Goffinet, Bernard;  Zaman, Sumaira;  Wegrzyn, Jill L.;  Li, Dexiang;  Liu, Jian;  Cui, Jie;  Sonnenschein, Eva C.;  Wang, Xiaobo;  Ruan, Jue;  Xue, Jia-Yu;  Shao, Zhu-Qing;  Song, Chi;  Fan, Guangyi;  Li, Zhen;  Zhang, Liangsheng;  Liu, Jianquan;  Liu, Zhong-Jian;  Jiao, Yuannian;  Wang, Xiao-Quan;  Wu, Hong;  Wang, Ertao;  Lisby, Michael;  Yang, Huanming;  Wang, Jian;  Liu, Xin;  Xu, Xun;  Li, Nan;  Soltis, Pamela S.;  Van de Peer, Yves;  Soltis, Douglas E.;  Gong, Xun;  Liu, Huan;  Zhang, Shouzhou
Adobe PDF(10553Kb)  |  收藏  |  浏览/下载：16/0  |  提交时间：2024/03/07
The water lily genome and the early evolution of flowering plants 期刊论文
NATURE, 2020, 卷号: 577, 页码: 79-84
作者:  Zhang, Liangsheng;  Chen, Fei;  Zhang, Xingtan;  Li, Zhen;  Zhao, Yiyong;  Lohaus, Rolf;  Chang, Xiaojun;  Dong, Wei;  Ho, Simon Y. W.;  Liu, Xing;  Song, Aixia;  Chen, Junhao;  Guo, Wenlei;  Wang, Zhengjia;  Zhuang, Yingyu;  Wang, Haifeng;  Chen, Xuequn;  Hu, Juan;  Liu, Yanhui;  Qin, Yuan;  Wang, Kai;  Dong, Shanshan;  Liu, Yang;  Zhang, Shouzhou;  Yu, Xianxian;  Wu, Qian;  Wang, Liangsheng;  Yan, Xueqing;  Jiao, Yuannian;  Kong, Hongzhi;  Zhou, Xiaofan;  Yu, Cuiwei;  Chen, Yuchu;  Li, Fan;  Wang, Jihua;  Chen, Wei;  Chen, Xinlu;  Jia, Qidong;  Zhang, Chi;  Jiang, Yifan;  Zhang, Wanbo;  Liu, Guanhua;  Fu, Jianyu;  Chen, Feng;  Ma, Hong;  Van de Peer, Yves;  Tang, Haibao
Adobe PDF(56231Kb)  |  收藏  |  浏览/下载：115/1  |  提交时间：2022/03/01
The hornwort genome and early land plant evolution 期刊论文
NATURE PLANTS, 2020, 卷号: 6, 期号: 2, 页码: 107-118
作者:  Zhang, Jian;  Fu, Xin-Xing;  Li, Rui-Qi;  Zhao, Xiang;  Liu, Yang;  Li, Ming-He;  Zwaenepoel, Arthur;  Ma, Hong;  Goffinet, Bernard;  Guan, Yan-Long;  Xue, Jia-Yu;  Liao, Yi-Ying;  Wang, Qing-Feng;  Wang, Qing-Hua;  Wang, Jie-Yu;  Zhang, Guo Qiang;  Wang, Zhi-Wen;  Jia, Yu;  Wang, Mei-Zhi;  Dong, Shan-Shan;  Yang, Jian-Fen;  Jiao, Yuan-Nian;  Guo, Ya-Long;  Kong, Hong-Zhi;  Lu, An-Ming;  Yang, Huan-Ming;  Zhang, Shou-Zhou;  Van de Peer, Yves;  Liu, Zhong-Jian;  Chen, Zhi-Duan
Adobe PDF(1845Kb)  |  收藏  |  浏览/下载：115/1  |  提交时间：2022/03/01
Mitochondrial Phylogenomics of Early Land Plants: Mitigating the Effects of Saturation, Compositional Heterogeneity, and Codon-Usage Bias 期刊论文
SYSTEMATIC BIOLOGY, 2014, 卷号: 63, 期号: 6, 页码: 862-878
作者:  Liu, Yang;  Cox, Cymon J.;  Wang, Wei;  Goffinet, Bernard
Adobe PDF(1902Kb)  |  收藏  |  浏览/下载：60/0  |  提交时间：2023/03/30
Compositional heterogeneity  early land plants  evolutionary saturation  mitochondrial genome  phylogenomics  synonymous codon-usage bias