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Capturing single-copy nuclear genes, organellar genomes, and nuclear ribosomal DNA from deep genome skimming data for plant phylogenetics: A case study in Vitaceae 期刊论文
JOURNAL OF SYSTEMATICS AND EVOLUTION, 2021, 卷号: 59, 期号: 5, 页码: 1124-1138
作者:  Liu, Bin-Bin;  Ma, Zhi-Yao;  Ren, Chen;  Hodel, Richard G. J.;  Sun, Miao;  Liu, Xiu-Qun;  Liu, Guang-Ning;  Hong, De-Yuan;  Zimmer, Elizabeth A.;  Wen, Jun
Adobe PDF(2650Kb)  |  收藏  |  浏览/下载：69/0  |  提交时间：2023/02/24
deep genome skimming  Hyb-Seq  mitochondrial genes  nuclear ribosomal DNA  single-copy nuclear genes  Vitaceae  
The Chromosome-Based Rubber Tree Genome Provides New Insights into Spurge Genome Evolution and Rubber Biosynthesis 期刊论文
MOLECULAR PLANT, 2020, 卷号: 13, 期号: 2, 页码: 336-350
作者:  Liu, Jin;  Shi, Cong;  Shi, Cheng-Cheng;  Li, Wei;  Zhang, Qun-Jie;  Zhang, Yun;  Li, Kui;  Lu, Hui-Fang;  Shi, Chao;  Zhu, Si-Tao;  Xiao, Zai-Yun;  Nan, Hong;  Yue, Yao;  Zhu, Xun-Ge;  Wu, Yu;  Hong, Xiao-Ning;  Fan, Guang-Yi;  Tong, Yan;  Zhang, Dan;  Mao, Chang-Li;  Liu, Yun-Long;  Hao, Shi-Jie;  Liu, Wei-Qing;  Lv, Mei-Qi;  Zhang, Hai-Bin;  Liu, Yuan;  Hu-tang, Ge-Ran;  Wang, Jin-Peng;  Wang, Jia-Hao;  Sun, Ying-Huai;  Ni, Shu-Bang;  Chen, Wen-Bin;  Zhang, Xing-Cai;  Jiao, Yuan-Nian;  Eichler, Evan E.;  Li, Guo-Hua;  Liu, Xin;  Gao, Li-Zhi
Adobe PDF(2390Kb)  |  收藏  |  浏览/下载：172/0  |  提交时间：2022/03/01
rubber tree  rubber biosynthesis  chromosome evolution  whole-genome duplication  domestication  
Towards quantification of Holocene anthropogenic land-cover change in temperate China: A review in the light of pollen-based REVEALS reconstructions of regional plant cover 期刊论文
EARTH-SCIENCE REVIEWS, 2020, 卷号: 203
作者:  Li, Furong;  Gaillard, Marie-Jose;  Cao, Xianyong;  Herzschuh, Ulrike;  Sugita, Shinya;  Tarasov, Pavel E.;  Wagner, Mayke;  Xu, Qinghai;  Ni, Jian;  Wang, Weiming;  Zhao, Yan;  An, Chengbang;  Beusen, A. H. W.;  Chen, Fahu;  Feng, Zhaodong;  Goldewijk, C. G. M. Klein;  Huang, Xiaozhong;  Li, Yuecong;  Li, Yu;  Liu, Hongyan;  Sun, Aizhi;  Yao, Yifeng;  Zheng, Zhuo;  Jia, Xin
Adobe PDF(19084Kb)  |  收藏  |  浏览/下载：115/0  |  提交时间：2022/03/01
Relative pollen productivities  Pollen-vegetation modelling  Climate change  Land-use history  HYDE  
The Apostasia genome and the evolution of orchids 期刊论文
NATURE, 2017, 卷号: 549, 期号: 7672, 页码: 379+
作者:  Zhang, Guo-Qiang;  Liu, Ke-Wei;  Li, Zhen;  Lohaus, Rolf;  Hsiao, Yu-Yun;  Niu, Shan-Ce;  Wang, Jie-Yu;  Lin, Yao-Cheng;  Xu, Qing;  Chen, Li-Jun;  Yoshida, Kouki;  Fujiwara, Sumire;  Wang, Zhi-Wen;  Zhang, Yong-Qiang;  Mitsuda, Nobutaka;  Wang, Meina;  Liu, Guo-Hui;  Pecoraro, Lorenzo;  Huang, Hui-Xia;  Xiao, Xin-Ju;  Lin, Min;  Wu, Xin-Yi;  Wu, Wan-Lin;  Chen, You-Yi;  Chang, Song-Bin;  Sakamoto, Shingo;  Ohme-Takagi, Masaru;  Yagi, Masafumi;  Zeng, Si-Jin;  Shen, Ching-Yu;  Yeh, Chuan-Ming;  Luo, Yi-Bo;  Tsai, Wen-Chieh;  Van de Peer, Yves;  Liu, Zhong-Jian
Adobe PDF(759Kb)  |  收藏  |  浏览/下载：172/0  |  提交时间：2022/03/28
Concomitant loss of NDH complex-related genes within chloroplast and nuclear genomes in some orchids 期刊论文
PLANT JOURNAL, 2017, 卷号: 90, 期号: 5, 页码: 994-1006
作者:  Lin, Choun-Sea;  Chen, Jeremy J. W.;  Chiu, Chi-Chou;  Hsiao, Han C. W.;  Yang, Chen-Jui;  Jin, Xiao-Hua;  Leebens-Mack, James;  de Pamphilis, Claude W.;  Huang, Yao-Ting;  Yang, Ling-Hung;  Chang, Wan-Jung;  Kui, Ling;  Wong, Gane Ka-Shu;  Hu, Jer-Ming;  Wang, Wen;  Shih, Ming-Che
Adobe PDF(1226Kb)  |  收藏  |  浏览/下载：105/0  |  提交时间：2022/03/28
NDH complex  orchid  Apostasia odorata  gene loss  photoautotrophic plant  
The rise of angiosperm-dominated herbaceous floras: Insights from Ranunculaceae 期刊论文
SCIENTIFIC REPORTS, 2016, 卷号: 6
作者:  Wang, Wei;  Lin, Li;  Xiang, Xiao-Guo;  Ortiz, Rosa del C.;  Liu, Yang;  Xiang, Kun-Li;  Yu, Sheng-Xiang;  Xing, Yao-Wu;  Chen, Zhi-Duan
Adobe PDF(2611Kb)  |  收藏  |  浏览/下载：70/0  |  提交时间：2022/07/08
NDH expression marks major transitions in plant evolution and reveals coordinate intracellular gene loss 期刊论文
BMC PLANT BIOLOGY, 2015, 卷号: 15
作者:  Ruhlman, Tracey A.;  Chang, Wan-Jung;  Chen, Jeremy J. W.;  Huang, Yao-Ting;  Chan, Ming-Tsair;  Zhang, Jin;  Liao, De-Chih;  Blazier, John C.;  Jin, Xiaohua;  Shih, Ming-Che;  Jansen, Robert K.;  Lin, Choun-Sea
Adobe PDF(907Kb)  |  收藏  |  浏览/下载：140/0  |  提交时间：2022/09/13
Streptophyta  NAD(P)H dehydrogenase  Transcriptomics  Cyclic electron flow  Sig4  
Range expansion and habitat shift triggered elevated diversification of the rice genus (Oryza, Poaceae) during the Pleistocene 期刊论文
BMC EVOLUTIONARY BIOLOGY, 2015, 卷号: 15
作者:  Lin, Li;  Tang, Liang;  Bai, Yun-Jun;  Tang, Zhi-Yao;  Wang, Wei;  Chen, Zhi-Duan
Adobe PDF(4953Kb)  |  收藏  |  浏览/下载：67/0  |  提交时间：2022/09/13