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Species delimitation of the liquorice tribe (Leguminosae: Glycyrrhizeae) based on phylogenomic and machine learning analyses 期刊论文
JOURNAL OF SYSTEMATICS AND EVOLUTION, 2023, 卷号: 61, 期号: 1, 页码: 22-41
作者:  Duan, Lei;  Han, Li-Na;  Liu, Bin-Bin;  Leostrin, Artem;  Harris, A. J.;  Wang, Lin;  Arslan, Emine;  Ertugrul, Kuddisi;  Knyazev, Mikhail;  Hantemirova, Elena;  Wen, Jun;  Chen, Hong-Feng
Adobe PDF(1597Kb)  |  收藏  |  浏览/下载：18/0  |  提交时间：2024/03/07
character evolution  Glycyrrhiza  machine learning analysis  medicinal group  phylogenomics  species delimitation  
Mitochondrial genes from 18 angiosperms fill sampling gaps for phylogenomic inferences of the early diversification of flowering plants 期刊论文
JOURNAL OF SYSTEMATICS AND EVOLUTION, 2022, 卷号: 60, 期号: 4, 页码: 773-788
作者:  Xue, Jia-Yu;  Dong, Shan-Shan;  Wang, Ming-Qiang;  Song, Tian-Qiang;  Zhou, Guang-Can;  Li, Zhen;  Van de Peer, Yves;  Shao, Zhu-Qing;  Wang, Wei;  Chen, Min;  Zhang, Yan-Mei;  Sun, Xiao-Qin;  Chen, Hong-Feng;  Zhang, Yong-Xia;  Zhang, Shou-Zhou;  Chen, Fei;  Zhang, Liang-Sheng;  Cox, Cymon;  Liu, Yang;  Wang, Qiang;  Hang, Yue-Yu
Adobe PDF(1723Kb)  |  收藏  |  浏览/下载：11/0  |  提交时间：2024/03/07
early angiosperm radiation  incongruence  mitochondrial genome  phylogenomics  systematic error  
Out of the Pan-Himalaya: Evolutionary history of the Paeoniaceae revealed by phylogenomics 期刊论文
JOURNAL OF SYSTEMATICS AND EVOLUTION, 2021, 卷号: 59, 期号: 6, 页码: 1170-1182
作者:  Zhou, Shi-Liang;  Xu, Chao;  Liu, Jing;  Yu, Yan;  Wu, Ping;  Cheng, Tao;  Hong, De-Yuan
Adobe PDF(1288Kb)  |  收藏  |  浏览/下载：66/0  |  提交时间：2023/02/24
biogeography  molecular dating  Paeonia  phylogeny  reticulate evolution  
Capturing single-copy nuclear genes, organellar genomes, and nuclear ribosomal DNA from deep genome skimming data for plant phylogenetics: A case study in Vitaceae 期刊论文
JOURNAL OF SYSTEMATICS AND EVOLUTION, 2021, 卷号: 59, 期号: 5, 页码: 1124-1138
作者:  Liu, Bin-Bin;  Ma, Zhi-Yao;  Ren, Chen;  Hodel, Richard G. J.;  Sun, Miao;  Liu, Xiu-Qun;  Liu, Guang-Ning;  Hong, De-Yuan;  Zimmer, Elizabeth A.;  Wen, Jun
Adobe PDF(2650Kb)  |  收藏  |  浏览/下载：69/0  |  提交时间：2023/02/24
deep genome skimming  Hyb-Seq  mitochondrial genes  nuclear ribosomal DNA  single-copy nuclear genes  Vitaceae  
Major clades and a revised classification of Magnolia and Magnoliaceae based on whole plastid genome sequences via genome skimming 期刊论文
JOURNAL OF SYSTEMATICS AND EVOLUTION, 2020, 卷号: 58, 期号: 5, 页码: 673-695
作者:  Wang, Yu-Bing;  Liu, Bin-Bin;  Nie, Ze-Long;  Chen, Hong-Feng;  Chen, Fa-Ju;  Figlar, Richard B.;  Wen, Jun
Adobe PDF(20587Kb)  |  收藏  |  浏览/下载：82/0  |  提交时间：2022/03/01
classification  genome skimming  Magnolia  Magnoliaceae  plastome  taxonomy  
Phylogenomic analyses of the Photinia complex support the recognition of a new genus Phippsiomeles and the resurrection of a redefined Stranvaesia in Maleae (Rosaceae) 期刊论文
JOURNAL OF SYSTEMATICS AND EVOLUTION, 2019, 卷号: 57, 期号: 6, 页码: 678-694
作者:  Liu, Bin-Bin;  Hong, De-Yuan;  Zhou, Shi-Liang;  Xu, Chao;  Dong, Wen-Pan;  Johnson, Gabriel;  Wen, Jun
Adobe PDF(1734Kb)  |  收藏  |  浏览/下载：104/0  |  提交时间：2022/01/06
genome skimming  hybridization  Maleae  nrDNA  Phippsiomeles  Rosaceae  Stranvaesia  
Tree of life for the genera of Chinese vascular plants 期刊论文
JOURNAL OF SYSTEMATICS AND EVOLUTION, 2016, 卷号: 54, 期号: 4, 页码: 277-306
作者:  Chen, Zhi-Duan;  Yang, Tuo;  Lin, Li;  Lu, Li-Min;  Li, Hong-Lei;  Sun, Miao;  Liu, Bing;  Chen, Min;  Niu, Yan-Ting;  Ye, Jian-Fei;  Cao, Zhi-Yong;  Liu, Hong-Mei;  Wang, Xiao-Ming;  Wang, Wei;  Zhang, Jing-Bo;  Meng, Zhen;  Cao, Wei;  Li, Jian-Hui;  Wu, Sheng-Dan;  Zhao, Hui-Ling;  Liu, Zhong-Jian;  Du, Zhi-Yuan;  Wang, Qing-Feng;  Guo, Jing;  Tan, Xin-Xin;  Su, Jun-Xia;  Zhang, Lin-Jing;  Yang, Lei-Lei;  Liao, Yi-Ying;  Li, Ming-He;  Zhang, Guo-Qiang;  Chung, Shih-Wen;  Zhang, Jian;  Xiang, Kun-Li;  Li, Rui-Qi;  Soltis, Douglas E.;  Soltis, Pamela S.;  Zhou, Shi-Liang;  Ran, Jin-Hua;  Wang, Xiao-Quan;  Jin, Xiao-Hua;  Chen, You-Sheng;  Gao, Tian-Gang;  Li, Jian-Hua;  Zhang, Shou-Zhou;  Lu, An-Ming
Adobe PDF(2587Kb)  |  收藏  |  浏览/下载：100/0  |  提交时间：2022/07/08
China  DarwinTree  megaphylogeny  regional tree of life  SoTree  vascular plants  
The Tree of Life: China project 期刊论文
JOURNAL OF SYSTEMATICS AND EVOLUTION, 2016, 卷号: 54, 期号: 4, 页码: CP5-276
作者:  Chen, Zhi-Duan;  Lu, An-Ming;  Zhang, Shou-Zhou;  Wang, Qing-Feng;  Liu, Zhong-Jian;  Li, De-Zhu;  Ma, Hong;  Li, Jian-Hua;  Soltis, Douglas E.;  Soltis, Pamela S.;  Wen, Jun
Adobe PDF(107Kb)  |  收藏  |  浏览/下载：85/0  |  提交时间：2022/07/08
A community-derived classification for extant lycophytes and ferns 期刊论文
JOURNAL OF SYSTEMATICS AND EVOLUTION, 2016, 卷号: 54, 期号: 6, 页码: 563-603
作者:  Schuettpelz, Eric;  Schneider, Harald;  Smith, Alan R.;  Hovenkamp, Peter;  Prado, Jefferson;  Rouhan, Germinal;  Salino, Alexandre;  Sundue, Michael;  Almeida, Thais Elias;  Parris, Barbara;  Sessa, Emily B.;  Field, Ashley R.;  de Gasper, Andre Luis;  Rothfels, Carl J.;  Windham, Michael D.;  Lehnert, Marcus;  Dauphin, Benjamin;  Ebihara, Atsushi;  Lehtonen, Samuli;  Schwartsburd, Pedro Bond;  Metzgar, Jordan;  Zhang, Li-Bing;  Kuo, Li-Yaung;  Brownsey, Patrick J.;  Kato, Masahiro;  Arana, Marcelo Daniel;  Assis, Francine C.;  Barker, Michael S.;  Barrington, David S.;  Chang, Ho-Ming;  Chang, Yi-Han;  Chao, Yi-Shan;  Chen, Cheng-Wei;  Chen, De-Kui;  Chiou, Wen-Liang;  Dittrich, Vinicius Antonio de Oliveira;  Duan, Yi-Fan;  Dubuisson, Jean-Yves;  Farrar, Donald R.;  Fawcett, Susan;  Gabriel y Galan, Jose Maria;  Goes-Neto, Luiz Armando de Araujo;  Grant, Jason R.;  Grusz, Amanda L.;  Haufler, Christopher;  Hauk, Warren;  He, Hai;  Hennequin, Sabine;  Hirai, Regina Yoshie;  Huiet, Layne;  Kessler, Michael;  Korall, Petra;  Labiak, Paulo H.;  Larsson, Anders;  Leon, Blanca;  Li, Chun-Xiang;  Li, Fay-Wei;  Link-Perez, Melanie;  Liu, Hong-Mei;  Ngan Thi Lu;  Meza-Torres, Esteban I.;  Miao, Xin-Yuan;  Moran, Robbin;  Mynssen, Claudine Massi;  Nagalingum, Nathalie;  Ollgaard, Benjamin;  Paul, Alison M.;  Pereira, Jovani B. de S.;  Perrie, Leon R.;  Ponce, Monica;  Ranker, Tom A.;  Schulz, Christian;  Shinohara, Wataru;  Shmakov, Alexander;  Sigel, Erin M.;  de Souza, Filipe Soares;  Sylvestre, Lana da Silva;  Testo, Weston;  Triana-Moreno, Luz Amparo;  Tsutsumi, Chie;  Tuomisto, Hanna;  Valdespino, Ivan A.;  Vasco, Alejandra;  Viveros, Raquel Stauffer;  Weakley, Alan;  Wei, Ran;  Weststrand, Stina;  Wolf, Paul G.;  Yatskievych, George;  Xu, Xiao-Gang;  Yan, Yue-Hong;  Zhang, Liang;  Zhang, Xian-Chun;  Zhou, Xin-Mao
Adobe PDF(687Kb)  |  收藏  |  浏览/下载：356/0  |  提交时间：2022/07/08
classification  ferns  lycophytes  monophyly  phylogeny  pteridophytes  
Functional and evolutionary analyses of Primulina heterotricha CYC1C gene in tobacco and Arabidopsis transformation systems 期刊论文
JOURNAL OF SYSTEMATICS AND EVOLUTION, 2014, 卷号: 52, 期号: 1, 页码: 112-123
作者:  Liu, Bo-Ling;  Pang, Hong-Bo;  Yang, Xia;  Wang, Yin-Zheng
Adobe PDF(1854Kb)  |  收藏  |  浏览/下载：49/0  |  提交时间：2023/03/30
Arabidopsis  CYC-like genes  floral zygomorphy  Primulina heterotricha  tobacco  transgene