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Species delimitation of the liquorice tribe (Leguminosae: Glycyrrhizeae) based on phylogenomic and machine learning analyses 期刊论文
JOURNAL OF SYSTEMATICS AND EVOLUTION, 2023, 卷号: 61, 期号: 1, 页码: 22-41
作者:  Duan, Lei;  Han, Li-Na;  Liu, Bin-Bin;  Leostrin, Artem;  Harris, A. J.;  Wang, Lin;  Arslan, Emine;  Ertugrul, Kuddisi;  Knyazev, Mikhail;  Hantemirova, Elena;  Wen, Jun;  Chen, Hong-Feng
Adobe PDF(1597Kb)  |  收藏  |  浏览/下载：17/0  |  提交时间：2024/03/07
character evolution  Glycyrrhiza  machine learning analysis  medicinal group  phylogenomics  species delimitation  
Genome-wide signatures of the geographic expansion and breeding of soybean 期刊论文
SCIENCE CHINA-LIFE SCIENCES, 2023, 卷号: 66, 期号: 2, 页码: 350-365
作者:  Li, Ying-Hui;  Qin, Chao;  Wang, Li;  Jiao, Chengzhi;  Hong, Huilong;  Tian, Yu;  Li, Yanfei;  Xing, Guangnan;  Wang, Jun;  Gu, Yongzhe;  Gao, Xingpeng;  Li, Delin;  Li, Hongyu;  Liu, Zhangxiong;  Jing, Xin;  Feng, Beibei;  Zhao, Tao;  Guan, Rongxia;  Guo, Yong;  Liu, Jun;  Yan, Zhe;  Zhang, Lijuan;  Ge, Tianli;  Li, Xiangkong;  Wang, Xiaobo;  Qiu, Hongmei;  Zhang, Wanhai;  Luan, Xiaoyan;  Han, Yingpeng;  Han, Dezhi;  Chang, Ruzhen;  Guo, Yalong;  Reif, Jochen C.;  Jackson, Scott A.;  Liu, Bin;  Tian, Shilin;  Qiu, Li-juan
Adobe PDF(2524Kb)  |  收藏  |  浏览/下载：10/0  |  提交时间：2024/03/07
soybean  adaptation  introgression  flowering time  breeding  
Rearrangement and domestication as drivers of Rosaceae mitogenome plasticity 期刊论文
BMC BIOLOGY, 2022, 卷号: 20, 期号: 1
作者:  Sun, Manyi;  Zhang, Mingyue;  Chen, Xuening;  Liu, Yueyuan;  Liu, Binbin;  Li, Jiaming;  Wang, Runze;  Zhao, Kejiao;  Wu, Jun
Adobe PDF(3866Kb)  |  收藏  |  浏览/下载：11/0  |  提交时间：2024/03/07
Mitogenome  Rosaceae  Rearrangement rate  Domestication  
Phylogenomic conflict analyses in the apple genus Malus s.l. reveal widespread hybridization and allopolyploidy driving diversification, with insights into the complex biogeographic history in the Northern Hemisphere 期刊论文
JOURNAL OF INTEGRATIVE PLANT BIOLOGY, 2022, 卷号: 64, 期号: 5, 页码: 1020-1043
作者:  Liu, Bin-Bin;  Ren, Chen;  Kwak, Myounghai;  Hodel, Richard G. J.;  Xu, Chao;  He, Jian;  Zhou, Wen-Bin;  Huang, Chien-Hsun;  Ma, Hong;  Qian, Guan-Ze;  Hong, De-Yuan;  Wen, Jun
Adobe PDF(3053Kb)  |  收藏  |  浏览/下载：14/0  |  提交时间：2024/03/07
deep genome skimming  genomic discordance  historical biogeography  massive extinction  reticulate evolution  single-copy nuclear genes  
A genome for Cissus illustrates features underlying its evolutionary success in dry savannas 期刊论文
HORTICULTURE RESEARCH, 2022, 卷号: 9
作者:  Xin, Haiping;  Wang, Yi;  Li, Qingyun;  Wan, Tao;  Hou, Yujun;  Liu, Yuanshuang;  Gichuki, Duncan Kiragu;  Zhou, Huimin;  Zhu, Zhenfei;  Xu, Chen;  Zhou, Yadong;  Liu, Zhiming;  Li, Rongjun;  Liu, Bing;  Lu, Limin;  Jiang, Hongsheng;  Zhang, Jisen;  Wan, Junnan;  Aryal, Rishi;  Hu, Guangwan;  Chen, Zhiduan;  Gituru, Robert Wahiti;  Liang, Zhenchang;  Wen, Jun;  Wang, Qingfeng
Adobe PDF(2841Kb)  |  收藏  |  浏览/下载：12/0  |  提交时间：2024/03/07
Phylogenomic approaches untangle early divergences and complex diversifications of the olive plant family 期刊论文
BMC BIOLOGY, 2022, 卷号: 20, 期号: 1
作者:  Dong, Wenpan;  Li, Enze;  Liu, Yanlei;  Xu, Chao;  Wang, Yushuang;  Liu, Kangjia;  Cui, Xingyong;  Sun, Jiahui;  Suo, Zhili;  Zhang, Zhixiang;  Wen, Jun;  Zhou, Shiliang
Adobe PDF(4457Kb)  |  收藏  |  浏览/下载：13/0  |  提交时间：2024/03/07
Ancient introgression  Gene tree conflict  Incomplete lineage sorting  Oleaceae  Phylogenomics  Rate heterogeneity  
Synthesis of Nuclear and Chloroplast Data Combined With Network Analyses Supports the Polyploid Origin of the Apple Tribe and the Hybrid Origin of the Maleae-Gillenieae Clade 期刊论文
FRONTIERS IN PLANT SCIENCE, 2022, 卷号: 12
作者:  Hodel, Richard G. J.;  Zimmer, Elizabeth A.;  Liu, Bin-Bin;  Wen, Jun
Adobe PDF(3910Kb)  |  收藏  |  浏览/下载：11/0  |  提交时间：2024/03/07
allopolyploidy  ancient hybridization  cytonuclear conflict  genome doubling  phylogenetic networks  phylogenomics  reticulate evolution  
Genomes of leafy and leafless Platanthera orchids illuminate the evolution of mycoheterotrophy 期刊论文
NATURE PLANTS, 2022, 卷号: 8, 期号: 4, 页码: 373+
作者:  Li, Ming-He;  Liu, Ke-Wei;  Li, Zhen;  Lu, Hsiang-Chia;  Ye, Qin-Liang;  Zhang, Diyang;  Wang, Jie-Yu;  Li, Yu-Feng;  Zhong, Zhi-Ming;  Liu, Xuedie;  Yu, Xia;  Liu, Ding-Kun;  Tu, Xiong-De;  Liu, Bin;  Hao, Yang;  Liao, Xing-Yu;  Jiang, Yu-Ting;  Sun, Wei-Hong;  Chen, Jinliao;  Chen, Yan-Qiong;  Ai, Ye;  Zhai, Jun-Wen;  Wu, Sha-Sha;  Zhou, Zhuang;  Hsiao, Yu-Yun;  Wu, Wan-Lin;  Chen, You-Yi;  Lin, Yu-Fu;  Hsu, Jui-Ling;  Li, Chia-Ying;  Wang, Zhi-Wen;  Zhao, Xiang;  Zhong, Wen-Ying;  Ma, Xiao-Kai;  Ma, Liang;  Huang, Jie;  Chen, Gui-Zhen;  Huang, Ming-Zhong;  Huang, Laiqiang;  Peng, Dong-Hui;  Luo, Yi-Bo;  Zou, Shuang-Quan;  Chen, Shi-Pin;  Lan, Siren;  Tsai, Wen-Chieh;  van de Peer, Yves;  Liu, Zhong-Jian
Adobe PDF(8532Kb)  |  收藏  |  浏览/下载：11/0  |  提交时间：2024/03/07
Phylogenomic relationships and species identification of the olive genus Olea (Oleaceae) 期刊论文
JOURNAL OF SYSTEMATICS AND EVOLUTION, 2022, 卷号: 60, 期号: 6, 页码: 1263-1280
作者:  Dong, Wen-Pan;  Sun, Jia-Hui;  Liu, Yan-Lei;  Xu, Chao;  Wang, Yi-Heng;  Suo, Zhi-Li;  Zhou, Shi-Liang;  Zhang, Zhi-Xiang;  Wen, Jun
Adobe PDF(2070Kb)  |  收藏  |  浏览/下载：8/0  |  提交时间：2024/03/07
Olea  phylogenomics  specific DNA barcode  species identification  super-barcode  
Cyphostemma calcarium, a new species of Vitaceae from the Ankarana Special Reserve, Madagascar 期刊论文
PHYTOKEYS, 2021, 期号: 180, 页码: 73-80
作者:  Rabarijaona, Romer Narindra;  Rafaralahy, Valisoa Louisicael;  Rakotovao, Charles;  Ranaivoson, Rindra Manasoa;  Liu, Bing;  Chen, Zhi-Duan;  Wen, Jun;  Lu, Li-Min
Adobe PDF(1497Kb)  |  收藏  |  浏览/下载：66/0  |  提交时间：2023/02/24
Cyphostemma calcarium  Madagascar  Vitaceae  Ankarana  Cyphostemma