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Disentangling a 40-year-old taxonomic puzzle: the phylogenetic position of Mimulicalyx (Lamiales) 期刊论文
BOTANICAL JOURNAL OF THE LINNEAN SOCIETY, 2023, 卷号: 201, 期号: 2, 页码: 135-153
作者:  Zhao, Fei;  Liu, Bing;  Liu, Su;  Min, Dao-Zhang;  Zhang, Ting;  Cai, Jie;  Zhou, Xin-Xin;  Chen, Bin;  Olmstead, Richard G.;  Xiang, Chun-Lei;  Li, Bo
Adobe PDF(2893Kb)  |  收藏  |  浏览/下载：31/0  |  提交时间：2024/03/07
Lamiales  molecular systematics  Phrymaceae  plastomes  Scrophulariaceae  
Phylogenomic conflict analyses in the apple genus Malus s.l. reveal widespread hybridization and allopolyploidy driving diversification, with insights into the complex biogeographic history in the Northern Hemisphere 期刊论文
JOURNAL OF INTEGRATIVE PLANT BIOLOGY, 2022, 卷号: 64, 期号: 5, 页码: 1020-1043
作者:  Liu, Bin-Bin;  Ren, Chen;  Kwak, Myounghai;  Hodel, Richard G. J.;  Xu, Chao;  He, Jian;  Zhou, Wen-Bin;  Huang, Chien-Hsun;  Ma, Hong;  Qian, Guan-Ze;  Hong, De-Yuan;  Wen, Jun
Adobe PDF(3053Kb)  |  收藏  |  浏览/下载：19/0  |  提交时间：2024/03/07
deep genome skimming  genomic discordance  historical biogeography  massive extinction  reticulate evolution  single-copy nuclear genes  
The flying spider-monkey tree fern genome provides insights into fern evolution and arborescence 期刊论文
NATURE PLANTS, 2022, 卷号: 8, 期号: 5, 页码: 500+
作者:  Huang, Xiong;  Wang, Wenling;  Gong, Ting;  Wickell, David;  Kuo, Li-Yaung;  Zhang, Xingtan;  Wen, Jialong;  Kim, Hoon;  Lu, Fachuang;  Zhao, Hansheng;  Chen, Song;  Li, Hui;  Wu, Wenqi;  Yu, Changjiang;  Chen, Su;  Fan, Wei;  Chen, Shuai;  Bao, Xiuqi;  Li, Li;  Zhang, Dan;  Jiang, Longyu;  Yan, Xiaojing;  Liao, Zhenyang;  Zhou, Gongke;  Guo, Yalong;  Ralph, John;  Sederoff, Ronald R.;  Wei, Hairong;  Zhu, Ping;  Li, Fay-Wei;  Ming, Ray;  Li, Quanzi
Adobe PDF(12162Kb)  |  收藏  |  浏览/下载：14/0  |  提交时间：2024/03/07
Stepwise selection of natural variations at CTB2 and CTB4a improves cold adaptation during domestication of japonica rice 期刊论文
NEW PHYTOLOGIST, 2021, 卷号: 231, 期号: 3, 页码: 1056-1072
作者:  Li, Jilong;  Zeng, Yawen;  Pan, Yinghua;  Zhou, Lei;  Zhang, Zhanying;  Guo, Haifeng;  Lou, Qijin;  Shui, Guanghou;  Huang, Hanguang;  Tian, He;  Guo, Yongmei;  Yuan, Pingrong;  Yang, Hong;  Pan, Guojun;  Wang, Ruiying;  Zhang, Hongliang;  Yang, Shuhua;  Guo, Yan;  Ge, Song;  Li, Jinjie;  Li, Zichao
Adobe PDF(2933Kb)  |  收藏  |  浏览/下载：82/0  |  提交时间：2023/02/24
cold adaptation  de novo mutation  rice  standing variation  stepwise selection  
Genome-wide investigation on transcriptional responses to drought stress in wild and cultivated rice 期刊论文
ENVIRONMENTAL AND EXPERIMENTAL BOTANY, 2021, 卷号: 189
作者:  Geng, Mu-Fan;  Wang, Xiu-Hua;  Wang, Mei-Xia;  Cai, Zhe;  Meng, Qing-Lin;  Wang, Xin;  Zhou, Lian;  Han, Jing-Dan;  Li, Ji-Long;  Zhang, Fu-Min;  Guo, Ya-Long;  Ge, Song
Adobe PDF(3006Kb)  |  收藏  |  浏览/下载：88/0  |  提交时间：2023/02/24
Drought stress  RNA-seq  WGCNA  Genomic hotspot  Cultivated and wild rice  
Divergence in flowering time is a major component contributing to reproductive isolation between two wild rice species (Oryza rufipogon and O. nivara) 期刊论文
SCIENCE CHINA-LIFE SCIENCES, 2020, 卷号: 63, 期号: 11, 页码: 1714-1724
作者:  Xu, Xun;  Meng, Qing-Lin;  Geng, Mu-Fan;  Ren, Ning-Ning;  Zhou, Lian;  Du, Yu-Su;  Cai, Zhe;  Wang, Mei-Xia;  Wang, Xin;  Wang, Xiu-Hua;  Han, Jing-Dan;  Jiang, Shuai;  Jing, Chun-Yan;  Liu, Rong;  Zheng, Xiao-Ming;  Yang, Qing-Wen;  Zhang, Fu-Min;  Ge, Song
Adobe PDF(899Kb)  |  收藏  |  浏览/下载：124/0  |  提交时间：2022/03/01
reproductive isolation  flowering time  speciation  adaptation  Oryza species  
The hornwort genome and early land plant evolution 期刊论文
NATURE PLANTS, 2020, 卷号: 6, 期号: 2, 页码: 107-118
作者:  Zhang, Jian;  Fu, Xin-Xing;  Li, Rui-Qi;  Zhao, Xiang;  Liu, Yang;  Li, Ming-He;  Zwaenepoel, Arthur;  Ma, Hong;  Goffinet, Bernard;  Guan, Yan-Long;  Xue, Jia-Yu;  Liao, Yi-Ying;  Wang, Qing-Feng;  Wang, Qing-Hua;  Wang, Jie-Yu;  Zhang, Guo Qiang;  Wang, Zhi-Wen;  Jia, Yu;  Wang, Mei-Zhi;  Dong, Shan-Shan;  Yang, Jian-Fen;  Jiao, Yuan-Nian;  Guo, Ya-Long;  Kong, Hong-Zhi;  Lu, An-Ming;  Yang, Huan-Ming;  Zhang, Shou-Zhou;  Van de Peer, Yves;  Liu, Zhong-Jian;  Chen, Zhi-Duan
Adobe PDF(1845Kb)  |  收藏  |  浏览/下载：124/1  |  提交时间：2022/03/01
Parallel Speciation of Wild Rice Associated with Habitat Shifts 期刊论文
MOLECULAR BIOLOGY AND EVOLUTION, 2019, 卷号: 36, 期号: 5, 页码: 875-889
作者:  Cai, Zhe;  Zhou, Lian;  Ren, Ning-Ning;  Xu, Xun;  Liu, Rong;  Huang, Lei;  Zheng, Xiao-Ming;  Meng, Qing-Lin;  Du, Yu-Su;  Wang, Mei-Xia;  Geng, Mu-Fan;  Chen, Wen-Li;  Jing, Chun-Yan;  Zou, Xin-Hui;  Guo, Jie;  Chen, Cheng-Bin;  Zeng, Hua-Zhong;  Liang, Yun-Tao;  Wei, Xing-Hua;  Guo, Ya-Long;  Zhou, Hai-Fei;  Zhang, Fu-Min;  Ge, Song
Adobe PDF(887Kb)  |  收藏  |  浏览/下载：2747/0  |  提交时间：2022/01/06
parallel speciation  reproductive isolation  adaptation  divergent selection  wild rice  
Liriodendron genome sheds light on angiosperm phylogeny and species-pair differentiation 期刊论文
NATURE PLANTS, 2019, 卷号: 5, 期号: 1, 页码: 18-25
作者:  Chen, Jinhui;  Hao, Zhaodong;  Guang, Xuanmin;  Zhao, Chenxi;  Wang, Pengkai;  Xue, Liangjiao;  Zhu, Qihui;  Yang, Linfeng;  Sheng, Yu;  Zhou, Yanwei;  Xu, Haibin;  Xie, Hongqing;  Long, Xiaofei;  Zhang, Jin;  Wang, Zhangrong;  Shi, Mingming;  Lu, Ye;  Liu, Siqin;  Guan, Lanhua;  Zhu, Qianhua;  Yang, Liming;  Ge, Song;  Cheng, Tielong;  Laux, Thomas;  Gao, Qiang;  Peng, Ye;  Liu, Na;  Yang, Sihai;  Shi, Jisen
Adobe PDF(3229Kb)  |  收藏  |  浏览/下载：168/0  |  提交时间：2022/01/06
Population genetics and evolutionary history of Miscanthus species in China 期刊论文
JOURNAL OF SYSTEMATICS AND EVOLUTION, 2019, 卷号: 57, 期号: 5, 页码: 530-542
作者:  Li, Shan-Shan;  Zhou, Hai-Fei;  Chen, Wen-Li;  Yan, Juan;  Cai, Zhe;  Wei, Ruo-Xun;  Chen, Chih-Hui;  Han, Bin;  Li, Jian-Qiang;  Sang, Tao;  Ge, Song
Adobe PDF(1772Kb)  |  收藏  |  浏览/下载：149/0  |  提交时间：2022/01/06
energy crop  genetic structure  Miscanthus  population dynamics  speciation