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RNA-seq, de novo transcriptome assembly and flavonoid gene analysis in 13 wild and cultivated berry fruit species with high content of phenolics 期刊论文
BMC GENOMICS, 2019, 卷号: 20, 期号: 1
作者:  Thole, Vera;  Bassard, Jean-Etienne;  Ramirez-Gonzalez, Ricardo;  Trick, Martin;  Afshar, Bijan Ghasemi;  Breitel, Dario;  Hill, Lionel;  Foito, Alexandre;  Shepherd, Louise;  Freitag, Sabine;  dos Santos, Claudia Nunes;  Menezes, Regina;  Banados, Pilar;  Naesby, Michael;  Wang, Liangsheng;  Sorokin, Artem;  Tikhonova, Olga;  Shelenga, Tatiana;  Stewart, Derek;  Vain, Philippe;  Martin, Cathie
Adobe PDF(3528Kb)  |  收藏  |  浏览/下载:107/0  |  提交时间:2022/01/06
13 berry fruit species  RNA-seq  de novo assembly  Anthocyanin  Gene expression analysis  Fruit ripening  Transcription factors  MYB  bHLH  WDR  
RNA methylomes reveal the m(6)A-mediated regulation of DNA demethylase gene SlDML2 in tomato fruit ripening 期刊论文
GENOME BIOLOGY, 2019, 卷号: 20, 期号: 1
作者:  Zhou, Leilei;  Tian, Shiping;  Qin, Guozheng
Adobe PDF(8580Kb)  |  收藏  |  浏览/下载:133/0  |  提交时间:2022/01/06
Fruit ripening  DNA methylation  mRNA m(6)A methylation  m(6)A RNA methylome  RNA demethylase SlALKBH2  DNA demethylase SlDML2  Colorless non-ripening  Tomato  
Recovery of the non-functional EGFP-assisted identification of mutants generated by CRISPR/Cas9 期刊论文
PLANT CELL REPORTS, 2019, 卷号: 38, 期号: 12, 页码: 1541-1549
作者:  Ren, Chong;  Guo, Yuchen;  Gathunga, Elias Kirabi;  Duan, Wei;  Li, Shaohua;  Liang, Zhenchang
Adobe PDF(1529Kb)  |  收藏  |  浏览/下载:88/0  |  提交时间:2022/01/06
Selection of mutants  CRISPR  Cas9  Non-functional EGFP  Reporter gene  
Next-Generation Genome Sequencing of Sedum plumbizincicola Sheds Light on the Structural Evolution of Plastid rRNA Operon and Phylogenetic Implications within Saxifragales 期刊论文
PLANTS-BASEL, 2019, 卷号: 8, 期号: 10
作者:  Ding, Hengwu;  Zhu, Ran;  Dong, Jinxiu;  Bi, De;  Jiang, Lan;  Zeng, Juhua;  Huang, Qingyu;  Liu, Huan;  Xu, Wenzhong;  Wu, Longhua;  Kan, Xianzhao
Adobe PDF(5649Kb)  |  收藏  |  浏览/下载:103/0  |  提交时间:2022/01/06
Sedum plumbizincicola  Crassulaceae  Saxifragales  rrn operon  phylogeny  
Genome-wide identification and expression analysis of HKT transcription factor under salt stress in nine plant species 期刊论文
ECOTOXICOLOGY AND ENVIRONMENTAL SAFETY, 2019, 卷号: 171, 页码: 435-442
作者:  Li, Huayang;  Xu, Guangzhao;  Yang, Chao;  Yang, Long;  Liang, Zhenchang
Adobe PDF(2244Kb)  |  收藏  |  浏览/下载:77/0  |  提交时间:2022/01/06
HKT  Salt resistance  Transporters  Plants  Development  
The complete chloroplast genome sequence of Lavandula dentata (Lamiaceae) and its phylogenetic analysis 期刊论文
MITOCHONDRIAL DNA PART B-RESOURCES, 2019, 卷号: 4, 期号: 2, 页码: 2135-2136
作者:  Li, Hui;  Li, Jingrui;  Bai, Hongtong;  Shi, Lei;  Wang, Huafang
Adobe PDF(919Kb)  |  收藏  |  浏览/下载:88/0  |  提交时间:2022/01/06
Chloroplast genome  Lavandula dentata  de novo sequencing  phylogenetic relationship  
The complete chloroplast genome sequence of Lavandula angustifolia (Lamiaceae), an introduced aromatic plant growing in China 期刊论文
MITOCHONDRIAL DNA PART B-RESOURCES, 2019, 卷号: 4, 期号: 1, 页码: 1352-1353
作者:  Li, Hui;  Li, Jingrui;  Bai, Hongtong;  Shi, Lei;  Wang, Huafang
Adobe PDF(1044Kb)  |  收藏  |  浏览/下载:100/0  |  提交时间:2022/01/06
Chloroplast genome  Lavandula angustifolia 'Jingxun 2'  de novo sequencing  phylogenetic relationship  
Plant-GQ: An Integrative Database of G-Quadruplex in Plant 期刊论文
JOURNAL OF COMPUTATIONAL BIOLOGY, 2019, 卷号: 26, 期号: 9, 页码: 1013-1019
作者:  Ge, Fangfang;  Wang, Yi;  Li, Huayang;  Zhang, Rui;  Wang, Xiaotong;  Li, Qingyun;  Liang, Zhenchang;  Yang, Long
Adobe PDF(407Kb)  |  收藏  |  浏览/下载:95/0  |  提交时间:2022/01/06
database  G-quadruplex  plant  
Whole-genome resequencing of 472 Vitis accessions for grapevine diversity and demographic history analyses 期刊论文
NATURE COMMUNICATIONS, 2019, 卷号: 10
作者:  Liang, Zhenchang;  Duan, Shengchang;  Sheng, Jun;  Zhu, Shusheng;  Ni, Xuemei;  Shao, Jianhui;  Liu, Chonghuai;  Nick, Peter;  Du, Fei;  Fan, Peige;  Mao, Ruzhi;  Zhu, Yifan;  Deng, Weiping;  Yang, Min;  Huang, Huichuan;  Liu, Yixiang;  Ding, Yiqing;  Liu, Xianju;  Jiang, Jianfu;  Zhu, Youyong;  Li, Shaohua;  He, Xiahong;  Chen, Wei;  Dong, Yang
Adobe PDF(4282Kb)  |  收藏  |  浏览/下载:138/0  |  提交时间:2022/01/06
Weighted Gene Co-expression Network Analysis (WGCNA) Reveals the Hub Role of Protein Ubiquitination in the Acquisition of Desiccation Tolerance in Boea hygrometrica 期刊论文
PLANT AND CELL PHYSIOLOGY, 2019, 卷号: 60, 期号: 12, 页码: 2707-2719
作者:  Lin, Chih-Ta;  Xu, Tao;  Xing, Shi-Lai;  Zhao, Li;  Sun, Run-Ze;  Liu, Yang;  Moore, John Paul;  Deng, Xin
Adobe PDF(1423Kb)  |  收藏  |  浏览/下载:110/0  |  提交时间:2022/01/06
Boea hygrometrica  Protein ubiquitination  Resurrection plant  Transcription repressor  VAL1  WGCNA