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A well-supported nuclear phylogeny of Poaceae and implications for the evolution of C4 photosynthesis 期刊论文
MOLECULAR PLANT, 2022, 卷号: 15, 期号: 4, 页码: 755-777
作者:  Huang, Weichen;  Zhang, Lin;  Columbus, J. Travis;  Hu, Yi;  Zhao, Yiyong;  Tang, Lin;  Guo, Zhenhua;  Chen, Wenli;  McKain, Michael;  Bartlett, Madelaine;  Huang, Chien-Hsun;  Li, De-Zhu;  Ge, Song;  Ma, Hong
Adobe PDF(3240Kb)  |  收藏  |  浏览/下载：10/0  |  提交时间：2024/03/07
Gramineae  transcriptome  nuclear phylogeny  molecular clock  C4 photosynthesis  ppc gene evolution  
The Tetracentron genome provides insight into the early evolution of eudicots and the formation of vessel elements 期刊论文
GENOME BIOLOGY, 2020, 卷号: 21, 期号: 1
作者:  Liu, Ping-Li;  Zhang, Xi;  Mao, Jian-Feng;  Hong, Yan-Ming;  Zhang, Ren-Gang;  Yilan, E.;  Nie, Shuai;  Jia, Kaihua;  Jiang, Chen-Kun;  He, Jian;  Shen, Weiwei;  He, Qizouhong;  Zheng, Wenqing;  Abbas, Samar;  Jewaria, Pawan Kumar;  Tian, Xuechan;  Liu, Chang-jun;  Jiang, Xiaomei;  Yin, Yafang;  Liu, Bo;  Wang, Li;  Jin, Biao;  Ma, Yongpeng;  Qiu, Zongbo;  Baluska, Frantisek;  Samaj, Jozef;  He, Xinqiang;  Niu, Shihui;  Xie, Jianbo;  Xie, Lei;  Xu, Huimin;  Kong, Hongzhi;  Ge, Song;  Dixon, Richard A.;  Jiao, Yuannian;  Lin, Jinxing
Adobe PDF(3373Kb)  |  收藏  |  浏览/下载：119/1  |  提交时间：2022/03/01
Tetracentron sinense  Vessel  Phylogenomic  Whole genome duplication  VND7  Resequencing  Genetic diversity  
Transposable elements drive rapid phenotypic variation in Capsella rubella 期刊论文
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 2019, 卷号: 116, 期号: 14, 页码: 6908-6913
作者:  Niu, Xiao-Min;  Xu, Yong-Chao;  Li, Zi-Wen;  Bian, Yu-Tao;  Hou, Xing-Hui;  Chen, Jia-Fu;  Zou, Yu-Pan;  Jiang, Juan;  Wu, Qiong;  Ge, Song;  Balasubramanian, Sureshkumar;  Guo, Ya-Long
Adobe PDF(1322Kb)  |  收藏  |  浏览/下载：149/0  |  提交时间：2022/01/06
Brassicaceae  Capsella rubella  natural variation  rapid phenotypic variation  transposable elements  
Resequencing 545 ginkgo genomes across the world reveals the evolutionary history of the living fossil 期刊论文
NATURE COMMUNICATIONS, 2019, 卷号: 10
作者:  Zhao, Yun-Peng;  Fan, Guangyi;  Yin, Ping-Ping;  Sun, Shuai;  Li, Ning;  Hong, Xiaoning;  Hu, Gang;  Zhang, He;  Zhang, Fu-Min;  Han, Jing-Dan;  Hao, Ya-Jun;  Xu, Qiwu;  Yang, Xianwei;  Xia, Wenjie;  Chen, Wenbin;  Lin, Han-Yang;  Zhang, Rui;  Chen, Jiang;  Zheng, Xiao-Ming;  Lee, Simon Ming-Yuen;  Lee, Joongku;  Uehara, Koichi;  Wang, Jian;  Yang, Huanming;  Fu, Cheng-Xin;  Liu, Xin;  Xu, Xun;  Ge, Song
Adobe PDF(2992Kb)  |  收藏  |  浏览/下载：128/0  |  提交时间：2022/01/06
Decrease of gene expression diversity during domestication of animals and plants 期刊论文
BMC EVOLUTIONARY BIOLOGY, 2019, 卷号: 19
作者:  Liu, Wei;  Chen, Lei;  Zhang, Shilai;  Hu, Fengyi;  Wang, Zheng;  Lyu, Jun;  Wang, Bao;  Xiang, Hui;  Zhao, Ruoping;  Tian, Zhixi;  Ge, Song;  Wang, Wen
Adobe PDF(845Kb)  |  收藏  |  浏览/下载：91/0  |  提交时间：2022/01/06
Domestication  Decrease  Gene expression diversity  
Parallel Speciation of Wild Rice Associated with Habitat Shifts 期刊论文
MOLECULAR BIOLOGY AND EVOLUTION, 2019, 卷号: 36, 期号: 5, 页码: 875-889
作者:  Cai, Zhe;  Zhou, Lian;  Ren, Ning-Ning;  Xu, Xun;  Liu, Rong;  Huang, Lei;  Zheng, Xiao-Ming;  Meng, Qing-Lin;  Du, Yu-Su;  Wang, Mei-Xia;  Geng, Mu-Fan;  Chen, Wen-Li;  Jing, Chun-Yan;  Zou, Xin-Hui;  Guo, Jie;  Chen, Cheng-Bin;  Zeng, Hua-Zhong;  Liang, Yun-Tao;  Wei, Xing-Hua;  Guo, Ya-Long;  Zhou, Hai-Fei;  Zhang, Fu-Min;  Ge, Song
Adobe PDF(887Kb)  |  收藏  |  浏览/下载：2670/0  |  提交时间：2022/01/06
parallel speciation  reproductive isolation  adaptation  divergent selection  wild rice  
Liriodendron genome sheds light on angiosperm phylogeny and species-pair differentiation 期刊论文
NATURE PLANTS, 2019, 卷号: 5, 期号: 1, 页码: 18-25
作者:  Chen, Jinhui;  Hao, Zhaodong;  Guang, Xuanmin;  Zhao, Chenxi;  Wang, Pengkai;  Xue, Liangjiao;  Zhu, Qihui;  Yang, Linfeng;  Sheng, Yu;  Zhou, Yanwei;  Xu, Haibin;  Xie, Hongqing;  Long, Xiaofei;  Zhang, Jin;  Wang, Zhangrong;  Shi, Mingming;  Lu, Ye;  Liu, Siqin;  Guan, Lanhua;  Zhu, Qianhua;  Yang, Liming;  Ge, Song;  Cheng, Tielong;  Laux, Thomas;  Gao, Qiang;  Peng, Ye;  Liu, Na;  Yang, Sihai;  Shi, Jisen
Adobe PDF(3229Kb)  |  收藏  |  浏览/下载：159/0  |  提交时间：2022/01/06
Population genetics and evolutionary history of Miscanthus species in China 期刊论文
JOURNAL OF SYSTEMATICS AND EVOLUTION, 2019, 卷号: 57, 期号: 5, 页码: 530-542
作者:  Li, Shan-Shan;  Zhou, Hai-Fei;  Chen, Wen-Li;  Yan, Juan;  Cai, Zhe;  Wei, Ruo-Xun;  Chen, Chih-Hui;  Han, Bin;  Li, Jian-Qiang;  Sang, Tao;  Ge, Song
Adobe PDF(1772Kb)  |  收藏  |  浏览/下载：143/0  |  提交时间：2022/01/06
energy crop  genetic structure  Miscanthus  population dynamics  speciation  
The impact and origin of copy number variations in the Oryza species 期刊论文
BMC GENOMICS, 2016, 卷号: 17
作者:  Bai, Zetao;  Chen, Jinfeng;  Liao, Yi;  Wang, Meijiao;  Liu, Rong;  Ge, Song;  Wing, Rod A.;  Chen, Mingsheng
Adobe PDF(2514Kb)  |  收藏  |  浏览/下载：98/0  |  提交时间：2022/07/08
Oryza species  Copy number variation (CNV)  NGS-based survey  CNV genes  Mutation mechanisms  
Draft genome of the living fossil Ginkgo biloba 期刊论文
GIGASCIENCE, 2016, 卷号: 5
作者:  Guan, Rui;  Zhao, Yunpeng;  Zhang, He;  Fan, Guangyi;  Liu, Xin;  Zhou, Wenbin;  Shi, Chengcheng;  Wang, Jiahao;  Liu, Weiqing;  Liang, Xinming;  Fu, Yuanyuan;  Ma, Kailong;  Zhao, Lijun;  Zhang, Fumin;  Lu, Zuhong;  Lee, Simon Ming-Yuen;  Xu, Xun;  Wang, Jian;  Yang, Huanming;  Fu, Chengxin;  Ge, Song;  Chen, Wenbin
Adobe PDF(1060Kb)  |  收藏  |  浏览/下载：108/0  |  提交时间：2022/07/08
Ginkgo genome  Evolution of LTR-RTs  Tandem gene duplication  Plant defense mechanism  Gymnosperm evolution  Whole genome duplication