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Integrated phylogenomic analyses unveil reticulate evolution in Parthenocissus (Vitaceae), highlighting speciation dynamics in the Himalayan-Hengduan Mountains 期刊论文
NEW PHYTOLOGIST, 2023, 卷号: 238, 期号: 2, 页码: 888-903
作者:  Yu, Jinren;  Niu, Yanting;  You, Yichen;  Cox, Cymon J.;  Barrett, Russell L.;  Trias-Blasi, Anna;  Guo, Jing;  Wen, Jun;  Lu, Limin;  Chen, Zhiduan
Adobe PDF(4450Kb)  |  收藏  |  浏览/下载：36/0  |  提交时间：2024/03/07
biogeography  comprehensive approach  Himalayan-Hengduan Mountains region  Parthenocissus  phylogenetic discordance  reticulation  speciation reversal  
Plant genome size modulates grassland community responses to multi-nutrient additions 期刊论文
NEW PHYTOLOGIST, 2022, 卷号: 236, 期号: 6, 页码: 2091-2102
作者:  Peng, Yang;  Yang, Jianxia;  Leitch, Ilia J.;  Guignard, Maite S.;  Seabloom, Eric W.;  Cao, Dong;  Zhao, Fangyuan;  Li, Huanlong;  Han, Xingguo;  Jiang, Yong;  Leitch, Andrew R.;  Wei, Cunzheng
Adobe PDF(1003Kb)  |  收藏  |  浏览/下载：8/0  |  提交时间：2024/03/07
biodiversity  genome size  grasslands  Inner Mongolia Steppe  light competition  multiple nutrient manipulations  net primary productivity  
Genomes shed light on the evolution of Begonia, a mega-diverse genus 期刊论文
NEW PHYTOLOGIST, 2022, 卷号: 234, 期号: 1, 页码: 295-310
作者:  Li, Lingfei;  Chen, Xiaoli;  Fang, Dongming;  Dong, Shanshan;  Guo, Xing;  Li, Na;  Campos-Dominguez, Lucia;  Wang, Wenguang;  Liu, Yang;  Lang, Xiaoan;  Peng, Yang;  Tian, Daike;  Thomas, Daniel C.;  Mu, Weixue;  Liu, Min;  Wu, Chenyu;  Yang, Ting;  Zhang, Suzhou;  Yang, Leilei;  Yang, Jianfen;  Liu, Zhong-Jian;  Zhang, Liangsheng;  Zhang, Xingtan;  Chen, Fei;  Jiao, Yuannian;  Guo, Yalong;  Hughes, Mark;  Wang, Wei;  Liu, Xiaofei;  Zhong, Chunmei;  Li, Airong;  Sahu, Sunil Kumar;  Yang, Huanming;  Wu, Ernest;  Sharbrough, Joel;  Lisby, Michael;  Liu, Xin;  Xu, Xun;  Soltis, Douglas E.;  Van de Peer, Yves;  Kidner, Catherine;  Zhang, Shouzhou;  Liu, Huan
Adobe PDF(3399Kb)  |  收藏  |  浏览/下载：14/0  |  提交时间：2024/03/07
Begonia  evolution  genomes  introgression  shade adaptation  whole-genome duplication  
Evolutionary strategies drive a balance of the interacting gene products for the CBL and CIPK gene families 期刊论文
NEW PHYTOLOGIST, 2020, 卷号: 226, 期号: 5, 页码: 1506-1516
作者:  Zhang, Xiaoxia;  Li, Xiaoxia;  Zhao, Ran;  Zhou, Yun;  Jiao, Yuannian
Adobe PDF(1336Kb)  |  收藏  |  浏览/下载：96/0  |  提交时间：2022/03/01
calcineurin B-like (CBL)  CBL-interacting protein kinase (CIPK)  gene balance hypothesis (GBH)  gene retention  whole-genome duplication (WGD)  
Transcriptional regulatory network of the light signaling pathways 期刊论文
NEW PHYTOLOGIST, 2020, 卷号: 227, 期号: 3, 页码: 683-697
作者:  Jing, Yanjun;  Lin, Rongcheng
Adobe PDF(1196Kb)  |  收藏  |  浏览/下载：82/0  |  提交时间：2022/03/01
chromatin modifications  light signaling  light-responsive genes  photomorphogenesis  photoreceptors  transcription factors (TFs)  transcriptional regulation  
Arabidopsis histone H3K4 demethylase JMJ17 functions in dehydration stress response 期刊论文
NEW PHYTOLOGIST, 2019, 卷号: 223, 期号: 3, 页码: 1372-1387
作者:  Huang, Shuangzhan;  Zhang, Ai;  Jin, Jing Bo;  Zhao, Bo;  Wang, Tian-Jing;  Wu, Yifan;  Wang, Shuang;  Liu, Yutong;  Wang, Jie;  Guo, Peng;  Ahmad, Rafiq;  Liu, Bao;  Xu, Zheng-Yi
Adobe PDF(3034Kb)  |  收藏  |  浏览/下载：108/0  |  提交时间：2022/01/06
abiotic stress  abscisic acid (ABA)  Arabidopsis thaliana  dehydration stress  histone demethylation  transcriptional regulation  
Functional and structural profiles of GST gene family from three Populus species reveal the sequence-function decoupling of orthologous genes 期刊论文
NEW PHYTOLOGIST, 2019, 卷号: 221, 期号: 2, 页码: 1060-1073
作者:  Yang, Qi;  Han, Xue-Min;  Gu, Jin-Ke;  Liu, Yan-Jing;  Yang, Mao-Jun;  Zeng, Qing-Yin
Adobe PDF(2710Kb)  |  收藏  |  浏览/下载：126/0  |  提交时间：2022/01/06
functional divergence  glutathione S-transferase (GST)  orthologous gene  Populus  protein function  
Global analysis of H3K4me3/H3K27me3 in Brachypodium distachyon reveals VRN3 as critical epigenetic regulation point in vernalization and provides insights into epigenetic memory 期刊论文
NEW PHYTOLOGIST, 2018, 卷号: 219, 期号: 4, 页码: 1373-1387
作者:  Huan, Qing;  Mao, Zhiwei;  Chong, Kang;  Zhang, Jingyu
Adobe PDF(2523Kb)  |  收藏  |  浏览/下载：101/0  |  提交时间：2022/02/25
Brachypodium distachyon  chromatin immunoprecipitation-sequencing (ChIP-Seq)  epigenetic regulation  flowering control  histone modification  vernalization  
Revisiting the phosphatidylethanolamine-binding protein (PEBP) gene family reveals cryptic FLOWERING LOCUS T gene homologs in gymnosperms and sheds new light on functional evolution 期刊论文
NEW PHYTOLOGIST, 2016, 卷号: 212, 期号: 3, 页码: 730-744
作者:  Liu, Yan-Yan;  Yang, Ke-Zhen;  Wei, Xiao-Xin;  Wang, Xiao-Quan
Adobe PDF(2391Kb)  |  收藏  |  浏览/下载：81/0  |  提交时间：2022/07/08
FLOWERING LOCUS T (FT)  functional evolution  gene and genome duplication  gymnosperms  molecular phylogeny  phosphatidylethanolamine-binding protein (PEBP) gene family  seed plants  
Sex-biased gene expression in dioecious garden asparagus (Asparagus officinalis) 期刊论文
NEW PHYTOLOGIST, 2015, 卷号: 207, 期号: 3, 页码: 883-892
作者:  Harkess, Alex;  Mercati, Francesco;  Shan, Hong-Yan;  Sunseri, Francesco;  Falavigna, Agostino;  Leebens-Mack, Jim
Adobe PDF(706Kb)  |  收藏  |  浏览/下载：78/0  |  提交时间：2022/09/13
dioecy  garden asparagus (Asparagus officinalis)  RNA-sequencing (RNA-Seq)  sex chromosomes  transcriptome