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Genomic footprints of sorghum domestication and breeding selection for multiple end uses 期刊论文
MOLECULAR PLANT, 2022, 卷号: 15, 期号: 3, 页码: 537-551
作者:  Wu, Xiaoyuan;  Liu, Yuanming;  Leng, Chuanyuan;  Liu, Zhiquan;  Li, Zhigang;  Lu, Xiaochun;  Cai, Hongwei;  Hao, Huaiqing;  Jing, Hai-Chun
Adobe PDF(3421Kb)  |  收藏  |  浏览/下载：12/0  |  提交时间：2024/03/07
sorghum (Sorghum bicolor)  genomic footprints  end uses  domestication and diversification genes SbTB1  Sh1 and Dry  molecular breeding  
Database Resources of the National Genomics Data Center, China National Center for Bioinformation in 2022 期刊论文
NUCLEIC ACIDS RESEARCH, 2022, 卷号: 50, 期号: D1, 页码: D27-D38
作者:  Xue, Yongbiao;  Bao, Yiming;  Zhang Zhang;  Zhao, Wenming;  Xiao, Jingfa;  He, Shun-min;  Zhang, Guoqing;  Li, Yixue;  Guoping, Zhao;  Chen, Runsheng;  Zeng, Jingyao;  Zhang, Yadong;  Shang, Yun-fei;  Mai, Jialin;  Shi, Shuo;  Lu, Mingming;  Bu, Congfan;  Zhang, Zhewen;  Du, Zhenglin;  Wang, Yinying;  Kang, Hongen;  Xu, Tianyi;  Hao, Lili;  Jia, Peilin;  Jiang, Shuai;  Qian, Qiheng;  Zhu, Tong-tong;  Shang, Yunfei;  Zong, Wenting;  Jin, Tong;  Zhang, Yuansheng;  Zou, Dong;  Zhang, Zhang;  Du, Qiang;  Feng, Changrui;  Ma, Lina;  Zhang, Sisi;  Wang, Anke;  Dong, Lili;  Wang, Yan-qing;  Liu, Wan;  Yan, Xing;  Ling, Yunchao;  Zhao, Guoping;  Zhou, Zhihua;  Kang, Wang;  Zhang, Tao;  Ma, Shuai;  Yan, Haoteng;  Liu, Zunpeng;  Ji, Zejun;  Cai, Yusheng;  Wang, Si;  Song, Moshi;  Ren, Jie;  Zhou, Qi;  Qu, Jing;  Zhang, Weiqi;  Liu, Guanghui;  Chen, Xu;  Chen, Tingting;  Sisi, Zhang;  Sun, Yanling;  Yu, Caixia;  Tang, Bixia;  Zhu, Junwei;  Zhai, Shuang;  Sun, Yubin;  Chen, Qiancheng;  Yang, Xiaoyu;  Zhang, Xin;  Sang, Zhengqi;  Wang, Yonggang;  Zhao, Yilin;  Chen, Huanxin;  Lan, Li;  Wang, Yanqing;  Ma, Yingke;  Jia, Yaokai;  Zheng, Xin-chang;  Chen, Meili;  Dong, Zou;  Zhu, Tongtong;  Ming, Chen;  Niu, Guangyi;  Pan, Rong;  Jing, Wei;  Sang, Jian;  Liu, Chang;  Xiong, Yujia;  Lili, Hao;  Zhang, Mochen;  Wang, Guoliang;  Yi, Lizhi;  Wei, Zhao;  Zong, Wenting;  Wu, Song;  Xiong, Zhuang;  Rujiao, Li;  Zheng, Gong;  Li, Rujiao;  Liu, Lin;  Li, Zhao;  Li, Qianpeng;  Wei, Jing;  Luo, Sicheng;  Wang, Jiajia;  Shi, Yirong;  Zhou, Honghong;  Zhang, Peng;  Song, Tingrui;  Li, Yanyan;  Yang, Fei;  Li, Mengwei;  Li, Zhao-hua;  Kang, Hongen;  Zheng, Xinchang;  Li, Ru-jiao;  Tian, Dongmei;  Liu, Xiaonan;  Li, Cuiping;  Teng, Xufei;  Song, Shuhui;  Zhang, Yang;  Niu, Guangyi;  Zhu, Tongtong;  Zhang, Yuansheng;  Chen, Ruru;  Zhang, Rongqin;  Xu, Feng;  Wang, Yifan;  Ling, Yunchao;  Zhou, Chenfen;  Wang, Haizhou;  Teschendorff, Andrew E.;  He, Yungang;  Zhen, Yang;  Li, Cuiping;  Zhu, Junwei;  Li, Lun;  Li, Na;  Gong, Zheng;  Chen, Meili;  Ying Cui;  Duan, Guangya;  Tong, Jin;  Wu, Gangao;  Huang, Tianhao;  Jin, Enhui;  Zhao, Wei;  Kang, Hailong;  Wang, Zhonghuang;  Zeng, Jingyao;  Chen, Hua;  Li, Mingkun;  Zhao, Wenming;  Ning, Wanshan;  Xue, Yu;  Liu, Yanhu;  Cui, Ying;  Zhou, Qijun;  Liu, Xingyan;  Zhang, Longlong;  Mao, Bingyu;  Zhang, Shihua;  Zhang, Yaping;  Wang, Guodong;  Zhu, Qianghui;  Li, Xin;  Li, Menghua;  Liu, Yuanming;  Luo, Hong;  Wu, Xiaoyuan;  Jing, Haichun;  Pan, Yitong;  Chen, Ming;  Ma, Lina;  Shi, Leisheng;  Li, Mingkun;  Lan, Li;  Bao, Yiming;  Zhao, Wen-ming;  Zuo, Zhixiang;  Ren, Jian;  Zhang, Xinxin;  Xiao, Yun;  Li, Xia;  Liu, Dan;  Zhang, Chi;  Xue, Yu;  Zhao, Zheng;  Jiang, Tao;  Wu, Wanying;  Zhao, Fangqing;  Meng, Xianwen;  Peng, Di;  Luo, Hao;  Gao, Feng;  Lin, Shaofeng;  Liu, Chuijie;  Guo, Anyuan;  Yuan, Hao;  Su, Tianhan;  Zhang, Yong E.;  Zhou, Yincong;  Zhang, Weizhi;  Fu, Shanshan;  Tan, Xiaodan;  Xie, Yubin;  Guo, Guoji;  Wang, Chenwei;  Liao, Xingyu;  Gao, Xin;  Wang, Jianxin;  Xie, Guiyan;  Yuan, Chunhui;  Tian, Feng;  Yang, Dechang;  Tang, Dachao;  Wu, Wenyi;  Gou, Yujie;  Han, Cheng;  Cui, Qinghua;  Li, Xiang Shang;  Li, Chuan-Yun;  Luo, XiaoTong;  Ren, Jia;  Li, Xia
Adobe PDF(1111Kb)  |  收藏  |  浏览/下载：23/0  |  提交时间：2024/03/07
Sorghum breeding in the genomic era: opportunities and challenges 期刊论文
THEORETICAL AND APPLIED GENETICS, 2021, 卷号: 134, 期号: 7, 页码: 1899-1924
作者:  Hao, Huaiqing;  Li, Zhigang;  Leng, Chuanyuan;  Lu, Cheng;  Luo, Hong;  Liu, Yuanming;  Wu, Xiaoyuan;  Liu, Zhiquan;  Shang, Li;  Jing, Hai-Chun
Adobe PDF(1852Kb)  |  收藏  |  浏览/下载：82/0  |  提交时间：2023/02/24
Database Resources of the National Genomics Data Center, China National Center for Bioinformation in 2021 期刊论文
NUCLEIC ACIDS RESEARCH, 2021, 卷号: 49, 期号: D1, 页码: D18-D28
作者:  Xue, Yongbiao;  Bao, Yiming;  Zhang, Zhang;  Zhao, Wenming;  Xiao, Jingfa;  He, Shunmin;  Zhang, Guoqing;  Li, Yixue;  Zhao, Guoping;  Chen, Runsheng;  Song, Shuhui;  Ma, Lina;  Zou, Dong;  Tian, Dongmei;  Li, Cuiping;  Zhu, Junwei;  Gong, Zheng;  Chen, Meili;  Wang, Anke;  Ma, Yingke;  Li, Mengwei;  Teng, Xufei;  Cui, Ying;  Duan, Guangya;  Zhang, Mochen;  Jin, Tong;  Shi, Chengmin;  Du, Zhenglin;  Zhang, Yadong;  Liu, Chuandong;  Li, Rujiao;  Zeng, Jingyao;  Hao, Lili;  Jiang, Shuai;  Chen, Hua;  Han, Dali;  Yongbiao, Xue;  Zhang, Tao;  Kang, Wang;  Qu, Jing;  Zhang, Weiqi;  Liu, Guang-Hui;  Liu, Lin;  Zhang, Yang;  Niu, Guangyi;  Zhu, Tongtong;  Feng, Changrui;  Liu, Xiaonan;  Zhang, Yuansheng;  Li, Zhao;  Chen, Ruru;  Li, Qianpeng;  Hua, Zhongyi;  Jiang, Chao;  Chen, Ziyuan;  He, Fangshu;  Zhao, Yuyang;  Jin, Yan;  Huang, Luqi;  Yuan, Yuan;  Zhou, Chenfen;  Xu, Qingwei;  He, Sheng;  Ye, Wei;  Cao, Ruifang;  Wang, Pengyu;  Ling, Yunchao;  Yan, Xing;  Wang, Qingzhong;  Du, Qiang;  Zong, Wenting;  Kang, Hongen;  Xiong, Zhuang;  Huan, Wendi;  Zhang, Sirui;  Xia, Qiguang;  Fan, Xiaojuan;  Wang, Zefeng;  Chen, Xu;  Chen, Tingting;  Zhang, Sisi;  Tang, Bixia;  Dong, Lili;  Zhang, Zhewen;  Wang, Zhonghuang;  Kang, Hailong;  Wang, Yanqing;  Wu, Song;  Wang, Honggen;  Chen, Ming;  Liu, Chang;  Xiong, Yujia;  Shao, Xueying;  Li, Yanyan;  Zhou, Honghong;  Chen, Xiaomin;  Zheng, Yu;  Kang, Quan;  Hao, Di;  Zhang, Lili;  Luo, Huaxia;  Hao, Yajing;  Zhang, Peng;  Nie, Zhi;  Yu, Shuhuan;  Yang, Fei;  Sang, Jian;  Li, Zhaohua;  Zhang, Xiangquan;  Zhou, Qing;  Zhai, Shuang;  Zhang, Yaping;  Wang, Guodong;  Zhu, Qianghui;  Li, Xin;  Li, Menghua;  Yan, Jun;  Li, Chen;  Wang, Zhennan;  Wang, Xiangfeng;  Liu, Yuanming;  Luo, Hong;  Wu, Xiaoyuan;  Jing, HaiChun;  Song, Tinrui;  Zhao, Yi;  Mehmood, Furrukh;  Ali, Shahid;  Ali, Amjad;  Saleem, Shoaib;  Hussain, Irfan;  Abbasi, Amir A.;  Zuo, Zhixiang;  Ren, Jian;  Zhang, Xinxin;  Xiao, Yun;  Li, Xia;  Tu, Yiran;  Xue, Yu;  Wu, Wanying;  Ji, Peifeng;  Zhao, Fangqing;  Meng, Xianwen;  Peng, Di;  Luo, Hao;  Gao, Feng;  Ning, Wanshan;  Lin, Shaofeng;  Liu, Teng;  Guo, An-Yuan;  Yuan, Hao;  Zhang, Yong E.;  Tan, Xiaodan;  Zhang, Weizhi;  Xie, Yubin;  Wang, Chenwei;  Liu, Chun-Jie;  Yang, De-Chang;  Tian, Feng;  Gao, Ge;  Tang, Dachao;  Yao, Lan;  Cui, Qinghua;  An, Ni A.;  Li, Chuan-Yun;  Luo, XiaoTong
Adobe PDF(489Kb)  |  收藏  |  浏览/下载：596/0  |  提交时间：2023/02/24
Data Comparison and Software Design for Easy Selection and Application of CRISPR-based Genome Editing Systems in Plants 期刊论文
GENOMICS PROTEOMICS & BIOINFORMATICS, 2021, 卷号: 19, 期号: 6, 页码: 937-948
作者:  Wang, Yi;  Lecourieux, Fatma;  Zhang, Rui;  Dai, Zhanwu;  Lecourieux, David;  Li, Shaohua;  Liang, Zhenchang
Adobe PDF(1151Kb)  |  收藏  |  浏览/下载：73/0  |  提交时间：2023/02/24
CRISPR/Cas  PAM-rich region  G-Q  Software  Database  
Genome-wide association study reveals that different pathways contribute to grain quality variation in sorghum (Sorghum bicolor) 期刊论文
BMC GENOMICS, 2020, 卷号: 21, 期号: 1
作者:  Kimani, Wilson;  Zhang, Li-Min;  Wu, Xiao-Yuan;  Hao, Huai-Qing;  Jing, Hai-Chun
Adobe PDF(2456Kb)  |  收藏  |  浏览/下载：102/0  |  提交时间：2022/03/01
Sorghum  Grain quality  Genome-wide association study  Amino acids  Starch  Tannins  
A role of age-dependent DNA methylation reprogramming in regulating the regeneration capacity of Boea hygrometrica leaves 期刊论文
FUNCTIONAL & INTEGRATIVE GENOMICS, 2020, 卷号: 20, 期号: 1, 页码: 133-149
作者:  Sun, Run-Ze;  Zuo, En-Hui;  Qi, Jin-Feng;  Liu, Yang;  Lin, Chih-Ta;  Deng, Xin
Adobe PDF(4574Kb)  |  收藏  |  浏览/下载：126/0  |  提交时间：2022/03/01
Shoot regeneration  Donor plant age  DNA methylome  Transcriptome  Resurrection plant  Boea hygrometrica  
RNA-seq, de novo transcriptome assembly and flavonoid gene analysis in 13 wild and cultivated berry fruit species with high content of phenolics 期刊论文
BMC GENOMICS, 2019, 卷号: 20, 期号: 1
作者:  Thole, Vera;  Bassard, Jean-Etienne;  Ramirez-Gonzalez, Ricardo;  Trick, Martin;  Afshar, Bijan Ghasemi;  Breitel, Dario;  Hill, Lionel;  Foito, Alexandre;  Shepherd, Louise;  Freitag, Sabine;  dos Santos, Claudia Nunes;  Menezes, Regina;  Banados, Pilar;  Naesby, Michael;  Wang, Liangsheng;  Sorokin, Artem;  Tikhonova, Olga;  Shelenga, Tatiana;  Stewart, Derek;  Vain, Philippe;  Martin, Cathie
Adobe PDF(3528Kb)  |  收藏  |  浏览/下载：116/0  |  提交时间：2022/01/06
13 berry fruit species  RNA-seq  de novo assembly  Anthocyanin  Gene expression analysis  Fruit ripening  Transcription factors  MYB  bHLH  WDR  
Genome-wide identification and expression analysis of HKT transcription factor under salt stress in nine plant species 期刊论文
ECOTOXICOLOGY AND ENVIRONMENTAL SAFETY, 2019, 卷号: 171, 页码: 435-442
作者:  Li, Huayang;  Xu, Guangzhao;  Yang, Chao;  Yang, Long;  Liang, Zhenchang
Adobe PDF(2244Kb)  |  收藏  |  浏览/下载：84/0  |  提交时间：2022/01/06
HKT  Salt resistance  Transporters  Plants  Development  
Whole-genome resequencing of 472 Vitis accessions for grapevine diversity and demographic history analyses 期刊论文
NATURE COMMUNICATIONS, 2019, 卷号: 10
作者:  Liang, Zhenchang;  Duan, Shengchang;  Sheng, Jun;  Zhu, Shusheng;  Ni, Xuemei;  Shao, Jianhui;  Liu, Chonghuai;  Nick, Peter;  Du, Fei;  Fan, Peige;  Mao, Ruzhi;  Zhu, Yifan;  Deng, Weiping;  Yang, Min;  Huang, Huichuan;  Liu, Yixiang;  Ding, Yiqing;  Liu, Xianju;  Jiang, Jianfu;  Zhu, Youyong;  Li, Shaohua;  He, Xiahong;  Chen, Wei;  Dong, Yang
Adobe PDF(4282Kb)  |  收藏  |  浏览/下载：140/0  |  提交时间：2022/01/06