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Stepwise selection of natural variations at CTB2 and CTB4a improves cold adaptation during domestication of japonica rice 期刊论文
NEW PHYTOLOGIST, 2021, 卷号: 231, 期号: 3, 页码: 1056-1072
作者:  Li, Jilong;  Zeng, Yawen;  Pan, Yinghua;  Zhou, Lei;  Zhang, Zhanying;  Guo, Haifeng;  Lou, Qijin;  Shui, Guanghou;  Huang, Hanguang;  Tian, He;  Guo, Yongmei;  Yuan, Pingrong;  Yang, Hong;  Pan, Guojun;  Wang, Ruiying;  Zhang, Hongliang;  Yang, Shuhua;  Guo, Yan;  Ge, Song;  Li, Jinjie;  Li, Zichao
Adobe PDF(2933Kb)  |  收藏  |  浏览/下载：76/0  |  提交时间：2023/02/24
cold adaptation  de novo mutation  rice  standing variation  stepwise selection  
Deciphering the high-quality genome sequence of coriander that causes controversial feelings 期刊论文
PLANT BIOTECHNOLOGY JOURNAL, 2020, 卷号: 18, 期号: 6, 页码: 1444-1456
作者:  Song, Xiaoming;  Wang, Jinpeng;  Li, Nan;  Yu, Jigao;  Meng, Fanbo;  Wei, Chendan;  Liu, Chao;  Chen, Wei;  Nie, Fulei;  Zhang, Zhikang;  Gong, Ke;  Li, Xinyu;  Hu, Jingjing;  Yang, Qihang;  Li, Yuxian;  Li, Chunjin;  Feng, Shuyan;  Guo, He;  Yuan, Jiaqing;  Pei, Qiaoying;  Yu, Tong;  Kang, Xi;  Zhao, Wei;  Lei, Tianyu;  Sun, Pengchuan;  Wang, Li;  Ge, Weina;  Guo, Di;  Duan, Xueqian;  Shen, Shaoqi;  Cui, Chunlin;  Yu, Ying;  Xie, Yangqin;  Zhang, Jin;  Hou, Yue;  Wang, Jianyu;  Wang, Jinyu;  Li, Xiu-Qing;  Paterson, Andrew H.;  Wang, Xiyin
Adobe PDF(13682Kb)  |  收藏  |  浏览/下载：291/0  |  提交时间：2022/03/01
De novo coriander genome  tetraploid  genome evolution  terpenoid biosynthesis pathway  RNA-Seq  metabolomics  
The Tetracentron genome provides insight into the early evolution of eudicots and the formation of vessel elements 期刊论文
GENOME BIOLOGY, 2020, 卷号: 21, 期号: 1
作者:  Liu, Ping-Li;  Zhang, Xi;  Mao, Jian-Feng;  Hong, Yan-Ming;  Zhang, Ren-Gang;  Yilan, E.;  Nie, Shuai;  Jia, Kaihua;  Jiang, Chen-Kun;  He, Jian;  Shen, Weiwei;  He, Qizouhong;  Zheng, Wenqing;  Abbas, Samar;  Jewaria, Pawan Kumar;  Tian, Xuechan;  Liu, Chang-jun;  Jiang, Xiaomei;  Yin, Yafang;  Liu, Bo;  Wang, Li;  Jin, Biao;  Ma, Yongpeng;  Qiu, Zongbo;  Baluska, Frantisek;  Samaj, Jozef;  He, Xinqiang;  Niu, Shihui;  Xie, Jianbo;  Xie, Lei;  Xu, Huimin;  Kong, Hongzhi;  Ge, Song;  Dixon, Richard A.;  Jiao, Yuannian;  Lin, Jinxing
Adobe PDF(3373Kb)  |  收藏  |  浏览/下载：114/1  |  提交时间：2022/03/01
Tetracentron sinense  Vessel  Phylogenomic  Whole genome duplication  VND7  Resequencing  Genetic diversity  
Decrease of gene expression diversity during domestication of animals and plants 期刊论文
BMC EVOLUTIONARY BIOLOGY, 2019, 卷号: 19
作者:  Liu, Wei;  Chen, Lei;  Zhang, Shilai;  Hu, Fengyi;  Wang, Zheng;  Lyu, Jun;  Wang, Bao;  Xiang, Hui;  Zhao, Ruoping;  Tian, Zhixi;  Ge, Song;  Wang, Wen
Adobe PDF(845Kb)  |  收藏  |  浏览/下载：89/0  |  提交时间：2022/01/06
Domestication  Decrease  Gene expression diversity  
Polyploidy Index and Its Implications for the Evolution of Polyploids 期刊论文
FRONTIERS IN GENETICS, 2019, 卷号: 10
作者:  Wang, Jinpeng;  Qin, Jun;  Sun, Pengchuan;  Ma, Xuelian;  Yu, Jigao;  Li, Yuxian;  Sun, Sangrong;  Lei, Tianyu;  Meng, Fanbo;  Wei, Chendan;  Liu, Xinyu;  Guo, He;  Liu, Xiaojian;  Xia, Ruiyan;  Li Wang;  Ge, Weina;  Song, Xiaoming;  Zhang, Lan;  Guo, Di;  Wang, Jinyu;  Baol, Shoutong;  Jiang, Shan;  Feng, Yishan;  Li, Xueping;  Paterson, Andrew H.;  Wang, Xiyin
Adobe PDF(3371Kb)  |  收藏  |  浏览/下载：97/0  |  提交时间：2022/01/06
polyploidy  angiosperm  P-index  genomics  bioinformatics  
Parallel Speciation of Wild Rice Associated with Habitat Shifts 期刊论文
MOLECULAR BIOLOGY AND EVOLUTION, 2019, 卷号: 36, 期号: 5, 页码: 875-889
作者:  Cai, Zhe;  Zhou, Lian;  Ren, Ning-Ning;  Xu, Xun;  Liu, Rong;  Huang, Lei;  Zheng, Xiao-Ming;  Meng, Qing-Lin;  Du, Yu-Su;  Wang, Mei-Xia;  Geng, Mu-Fan;  Chen, Wen-Li;  Jing, Chun-Yan;  Zou, Xin-Hui;  Guo, Jie;  Chen, Cheng-Bin;  Zeng, Hua-Zhong;  Liang, Yun-Tao;  Wei, Xing-Hua;  Guo, Ya-Long;  Zhou, Hai-Fei;  Zhang, Fu-Min;  Ge, Song
Adobe PDF(887Kb)  |  收藏  |  浏览/下载：2623/0  |  提交时间：2022/01/06
parallel speciation  reproductive isolation  adaptation  divergent selection  wild rice  
A selfish genetic element confers non-Mendelian inheritance in rice 期刊论文
SCIENCE, 2018, 卷号: 360, 期号: 6393, 页码: 1130-1132
作者:  Yu, Xiaowen;  Zhao, Zhigang;  Zheng, Xiaoming;  Zhou, Jiawu;  Kong, Weiyi;  Wang, Peiran;  Bai, Wenting;  Zheng, Hai;  Zhang, Huan;  Li, Jing;  Liu, Jiafan;  Wang, Qiming;  Zhang, Long;  Liu, Kai;  Yu, Yang;  Guo, Xiuping;  Wang, Jiulin;  Lin, Qibing;  Wu, Fuqing;  Ren, Yulong;  Zhu, Shanshan;  Zhang, Xin;  Cheng, Zhijun;  Lei, Cailin;  Liu, Shijia;  Liu, Xi;  Tian, Yunlu;  Jiang, Ling;  Ge, Song;  Wu, Chuanyin;  Tao, Dayun;  Wang, Haiyang;  Wan, Jianmin
Adobe PDF(1074Kb)  |  收藏  |  浏览/下载：89/0  |  提交时间：2022/02/25
Widespread and Adaptive Alterations in Genome-Wide Gene Expression Associated with Ecological Divergence of Two Oryza Species 期刊论文
MOLECULAR BIOLOGY AND EVOLUTION, 2016, 卷号: 33, 期号: 1, 页码: 62-78
作者:  Guo, Jie;  Liu, Rong;  Huang, Lei;  Zheng, Xiao-Ming;  Liu, Ping-Li;  Du, Yu-Su;  Cai, Zhe;  Zhou, Lian;  Wei, Xing-Hua;  Zhang, Fu-Min;  Ge, Song
Adobe PDF(782Kb)  |  收藏  |  浏览/下载：82/0  |  提交时间：2022/07/08
ecological speciation  expression evolution  adaptation  wild rice  
The association of functional nucleotide polymorphisms at DTH2 with the northward expansion of rice cultivation in Asia 期刊论文
Proceedings of the National Academy of Sciences of the United States of America, 2013, 卷号: 110, 期号: 8, 页码: 2775-2780
作者:  Wu W;  Zheng X-M;  Lu G;  Zhong Z;  Gao H;  Chen L;  Wu C;  Wang H-J;  Wang Q;  Zhou K;  Wang J-L;  Wu F;  Zhang X;  Guo X;  Cheng Z;  Lei C;  Lin Q;  Jiang L;  Wang H;  Ge S;  Wan J
Adobe PDF(802Kb)  |  收藏  |  浏览/下载：130/0  |  提交时间：2018/12/07
Nucleotide diversity of 11S seed storage protein gene and its implications for ecological adaptation of Oryza nivara 期刊论文
JOURNAL OF SYSTEMATICS AND EVOLUTION, 2013, 卷号: 51, 期号: 6, 页码: 641-651
作者:  Huang, Lei;  Du, Yu-Su;  Zheng, Xiao-Ming;  Liu, Rong;  Zhou, Hai-Fei;  Ge, Song
Adobe PDF(388Kb)  |  收藏  |  浏览/下载：40/0  |  提交时间：2023/04/25
adaptive evolution  nucleotide diversity  Oryza nivara  Oryza rufipogon  11S seed storage protein gene