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Fire-prone Rhamnaceae with South African affinities in Cretaceous Myanmar amber 期刊论文
NATURE PLANTS, 2022, 卷号: 8, 期号: 2, 页码: 125-135
作者:  Shi, Chao;  Wang, Shuo;  Cai, Hao-Hong;  Zhang, Hong-Rui;  Long, Xiao-Xuan;  Tihelka, Erik;  Song, Wei-cai;  Feng, Qi;  Jiang, Ri-xin;  Cai, Chen-Yang;  Lombard, Natasha;  Li, Xiong;  Yuan, Ji;  Zhu, Jian-ping;  Yang, Hui-yu;  Liu, Xiao-fan;  Xiang, Qiao-ping;  Zhao, Zun-tian;  Long, Chun-lin;  Schneider, Harald;  Zhang, Xian-chun;  Peng, Hua;  Li, De-Zhu;  Fan, Yong;  Engel, Michael S.;  Wang, Yong-Dong;  Spicer, Robert A.
Adobe PDF(3877Kb)  |  收藏  |  浏览/下载：13/0  |  提交时间：2024/03/07
Ancient plastid genomes solve the tree species mystery of the imperial wood Nanmu in the Forbidden City, the largest existing wooden palace complex in the world 期刊论文
PLANTS PEOPLE PLANET, 2022, 卷号: 4, 期号: 6, 页码: 696-709
作者:  Jiao, Lichao;  Lu, Yang;  Zhang, Ming;  Chen, Yongping;  Wang, Zhaoshan;  Guo, Yu;  Xu, Chao;  Guo, Juan;  He, Tuo;  Ma, Lingyu;  Gao, Wenqiang;  Wang, Jie;  Zhou, Shiliang;  Zhang, Yonggang;  Jiang, Xiaomei;  Baas, Pieter;  Yin, Yafang
Adobe PDF(31430Kb)  |  收藏  |  浏览/下载：17/0  |  提交时间：2024/03/07
ancient DNA  archeological wood  Forbidden City  Phoebe  species identification  wood anatomy  
Phylogenomic conflict analyses in the apple genus Malus s.l. reveal widespread hybridization and allopolyploidy driving diversification, with insights into the complex biogeographic history in the Northern Hemisphere 期刊论文
JOURNAL OF INTEGRATIVE PLANT BIOLOGY, 2022, 卷号: 64, 期号: 5, 页码: 1020-1043
作者:  Liu, Bin-Bin;  Ren, Chen;  Kwak, Myounghai;  Hodel, Richard G. J.;  Xu, Chao;  He, Jian;  Zhou, Wen-Bin;  Huang, Chien-Hsun;  Ma, Hong;  Qian, Guan-Ze;  Hong, De-Yuan;  Wen, Jun
Adobe PDF(3053Kb)  |  收藏  |  浏览/下载：16/0  |  提交时间：2024/03/07
deep genome skimming  genomic discordance  historical biogeography  massive extinction  reticulate evolution  single-copy nuclear genes  
Method for quick DNA barcode reference library construction 期刊论文
ECOLOGY AND EVOLUTION, 2021, 卷号: 11, 期号: 17, 页码: 11627-11638
作者:  Liu, Yanlei;  Xu, Chao;  Sun, Yuzhe;  Chen, Xun;  Dong, Wenpan;  Yang, Xueying;  Zhou, Shiliang
Adobe PDF(592Kb)  |  收藏  |  浏览/下载：71/0  |  提交时间：2023/02/24
Cotu  data processing method  DNA barcode  next-generation sequencing  
NOVOWrap: An automated solution for plastid genome assembly and structure standardization 期刊论文
MOLECULAR ECOLOGY RESOURCES, 2021, 卷号: 21, 期号: 6, 页码: 2177-2186
作者:  Wu, Ping;  Chen, Hao;  Xu, Chao;  Yang, Jie;  Zhang, Xian Chun;  Zhou, Shi Liang
Adobe PDF(924Kb)  |  收藏  |  浏览/下载：74/1  |  提交时间：2023/02/24
assembly  plastid genome  standardized structure  
Deciphering the high-quality genome sequence of coriander that causes controversial feelings 期刊论文
PLANT BIOTECHNOLOGY JOURNAL, 2020, 卷号: 18, 期号: 6, 页码: 1444-1456
作者:  Song, Xiaoming;  Wang, Jinpeng;  Li, Nan;  Yu, Jigao;  Meng, Fanbo;  Wei, Chendan;  Liu, Chao;  Chen, Wei;  Nie, Fulei;  Zhang, Zhikang;  Gong, Ke;  Li, Xinyu;  Hu, Jingjing;  Yang, Qihang;  Li, Yuxian;  Li, Chunjin;  Feng, Shuyan;  Guo, He;  Yuan, Jiaqing;  Pei, Qiaoying;  Yu, Tong;  Kang, Xi;  Zhao, Wei;  Lei, Tianyu;  Sun, Pengchuan;  Wang, Li;  Ge, Weina;  Guo, Di;  Duan, Xueqian;  Shen, Shaoqi;  Cui, Chunlin;  Yu, Ying;  Xie, Yangqin;  Zhang, Jin;  Hou, Yue;  Wang, Jianyu;  Wang, Jinyu;  Li, Xiu-Qing;  Paterson, Andrew H.;  Wang, Xiyin
Adobe PDF(13682Kb)  |  收藏  |  浏览/下载：297/0  |  提交时间：2022/03/01
De novo coriander genome  tetraploid  genome evolution  terpenoid biosynthesis pathway  RNA-Seq  metabolomics  
The Chromosome-Based Rubber Tree Genome Provides New Insights into Spurge Genome Evolution and Rubber Biosynthesis 期刊论文
MOLECULAR PLANT, 2020, 卷号: 13, 期号: 2, 页码: 336-350
作者:  Liu, Jin;  Shi, Cong;  Shi, Cheng-Cheng;  Li, Wei;  Zhang, Qun-Jie;  Zhang, Yun;  Li, Kui;  Lu, Hui-Fang;  Shi, Chao;  Zhu, Si-Tao;  Xiao, Zai-Yun;  Nan, Hong;  Yue, Yao;  Zhu, Xun-Ge;  Wu, Yu;  Hong, Xiao-Ning;  Fan, Guang-Yi;  Tong, Yan;  Zhang, Dan;  Mao, Chang-Li;  Liu, Yun-Long;  Hao, Shi-Jie;  Liu, Wei-Qing;  Lv, Mei-Qi;  Zhang, Hai-Bin;  Liu, Yuan;  Hu-tang, Ge-Ran;  Wang, Jin-Peng;  Wang, Jia-Hao;  Sun, Ying-Huai;  Ni, Shu-Bang;  Chen, Wen-Bin;  Zhang, Xing-Cai;  Jiao, Yuan-Nian;  Eichler, Evan E.;  Li, Guo-Hua;  Liu, Xin;  Gao, Li-Zhi
Adobe PDF(2390Kb)  |  收藏  |  浏览/下载：176/0  |  提交时间：2022/03/01
rubber tree  rubber biosynthesis  chromosome evolution  whole-genome duplication  domestication  
Molecular phylogeny and species delimitation of Stachyuraceae: Advocating a herbarium specimen-based phylogenomic approach in resolving species boundaries 期刊论文
JOURNAL OF SYSTEMATICS AND EVOLUTION, 2020, 卷号: 58, 期号: 5, 页码: 710-724
作者:  Su, Jun-Xia;  Dong, Cong-Cong;  Niu, Yan-Ting;  Lu, Li-Min;  Xu, Chao;  Liu, Bing;  Zhou, Shi-Liang;  Lu, An-Ming;  Zhu, Yu-Ping;  Wen, Jun;  Chen, Zhi-Duan
Adobe PDF(1772Kb)  |  收藏  |  浏览/下载：106/0  |  提交时间：2022/03/01
chloroplast genome  DNA reconstruction  phylogeny  specimen-based taxon sampling  Stachyuraceae  
Transposable elements drive rapid phenotypic variation in Capsella rubella 期刊论文
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 2019, 卷号: 116, 期号: 14, 页码: 6908-6913
作者:  Niu, Xiao-Min;  Xu, Yong-Chao;  Li, Zi-Wen;  Bian, Yu-Tao;  Hou, Xing-Hui;  Chen, Jia-Fu;  Zou, Yu-Pan;  Jiang, Juan;  Wu, Qiong;  Ge, Song;  Balasubramanian, Sureshkumar;  Guo, Ya-Long
Adobe PDF(1322Kb)  |  收藏  |  浏览/下载：149/0  |  提交时间：2022/01/06
Brassicaceae  Capsella rubella  natural variation  rapid phenotypic variation  transposable elements  
The PHOSPHATE1 genes participate in salt and Pi signaling pathways and play adaptive roles during soybean evolution 期刊论文
BMC PLANT BIOLOGY, 2019, 卷号: 19, 期号: 1
作者:  Wang, Yan;  Gao, Huihui;  He, Lingli;  Zhu, Weiwei;  Yan, Lixin;  Chen, Qingshan;  He, Chaoying
Adobe PDF(7698Kb)  |  收藏  |  浏览/下载：94/0  |  提交时间：2022/01/06
Abiotic stress  Adaptive evolution  Functional diversification  Gene expression  Orthologous gene  PHO1 gene family  Soybean