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Integrated phylogenomic analyses unveil reticulate evolution in Parthenocissus (Vitaceae), highlighting speciation dynamics in the Himalayan-Hengduan Mountains 期刊论文
NEW PHYTOLOGIST, 2023, 卷号: 238, 期号: 2, 页码: 888-903
作者:  Yu, Jinren;  Niu, Yanting;  You, Yichen;  Cox, Cymon J.;  Barrett, Russell L.;  Trias-Blasi, Anna;  Guo, Jing;  Wen, Jun;  Lu, Limin;  Chen, Zhiduan
Adobe PDF(4450Kb)  |  收藏  |  浏览/下载：28/0  |  提交时间：2024/03/07
biogeography  comprehensive approach  Himalayan-Hengduan Mountains region  Parthenocissus  phylogenetic discordance  reticulation  speciation reversal  
Genomes shed light on the evolution of Begonia, a mega-diverse genus 期刊论文
NEW PHYTOLOGIST, 2022, 卷号: 234, 期号: 1, 页码: 295-310
作者:  Li, Lingfei;  Chen, Xiaoli;  Fang, Dongming;  Dong, Shanshan;  Guo, Xing;  Li, Na;  Campos-Dominguez, Lucia;  Wang, Wenguang;  Liu, Yang;  Lang, Xiaoan;  Peng, Yang;  Tian, Daike;  Thomas, Daniel C.;  Mu, Weixue;  Liu, Min;  Wu, Chenyu;  Yang, Ting;  Zhang, Suzhou;  Yang, Leilei;  Yang, Jianfen;  Liu, Zhong-Jian;  Zhang, Liangsheng;  Zhang, Xingtan;  Chen, Fei;  Jiao, Yuannian;  Guo, Yalong;  Hughes, Mark;  Wang, Wei;  Liu, Xiaofei;  Zhong, Chunmei;  Li, Airong;  Sahu, Sunil Kumar;  Yang, Huanming;  Wu, Ernest;  Sharbrough, Joel;  Lisby, Michael;  Liu, Xin;  Xu, Xun;  Soltis, Douglas E.;  Van de Peer, Yves;  Kidner, Catherine;  Zhang, Shouzhou;  Liu, Huan
Adobe PDF(3399Kb)  |  收藏  |  浏览/下载：13/0  |  提交时间：2024/03/07
Begonia  evolution  genomes  introgression  shade adaptation  whole-genome duplication  
Identification of the target genes of AqAPETALA3-3 (AqAP3-3) in Aquilegia coerulea (Ranunculaceae) helps understand the molecular bases of the conserved and nonconserved features of petals 期刊论文
NEW PHYTOLOGIST, 2020, 卷号: 227, 期号: 4, 页码: 1235-1248
作者:  Jiang, Yongchao;  Wang, Meimei;  Zhang, Rui;  Xie, Jinghe;  Duan, Xiaoshan;  Shan, Hongyan;  Xu, Guixia;  Kong, Hongzhi
Adobe PDF(1459Kb)  |  收藏  |  浏览/下载：97/1  |  提交时间：2022/03/01
Aquilegia  binding sites  ChIP-seq  floral organ identity genes  petals  target genes  
The making of elaborate petals in Nigella through developmental repatterning 期刊论文
NEW PHYTOLOGIST, 2019, 卷号: 223, 期号: 1, 页码: 385-396
作者:  Yao, Xu;  Zhang, Wengen;  Duan, Xiaoshan;  Yuan, Yi;  Zhang, Rui;  Shan, Hongyan;  Kong, Hongzhi
Adobe PDF(3061Kb)  |  收藏  |  浏览/下载：110/0  |  提交时间：2022/01/06
adaptive evolution  developmental repatterning  elaborate petals  Evo-Devo  Nigella  
Functional and structural profiles of GST gene family from three Populus species reveal the sequence-function decoupling of orthologous genes 期刊论文
NEW PHYTOLOGIST, 2019, 卷号: 221, 期号: 2, 页码: 1060-1073
作者:  Yang, Qi;  Han, Xue-Min;  Gu, Jin-Ke;  Liu, Yan-Jing;  Yang, Mao-Jun;  Zeng, Qing-Yin
Adobe PDF(2710Kb)  |  收藏  |  浏览/下载：125/0  |  提交时间：2022/01/06
functional divergence  glutathione S-transferase (GST)  orthologous gene  Populus  protein function  
Sex-biased gene expression in dioecious garden asparagus (Asparagus officinalis) 期刊论文
NEW PHYTOLOGIST, 2015, 卷号: 207, 期号: 3, 页码: 883-892
作者:  Harkess, Alex;  Mercati, Francesco;  Shan, Hong-Yan;  Sunseri, Francesco;  Falavigna, Agostino;  Leebens-Mack, Jim
Adobe PDF(706Kb)  |  收藏  |  浏览/下载：75/0  |  提交时间：2022/09/13
dioecy  garden asparagus (Asparagus officinalis)  RNA-sequencing (RNA-Seq)  sex chromosomes  transcriptome  
Multilocus estimation of divergence times and ancestral population sizes of Oryza species and implications for the diversification of the genus 期刊论文
NEW PHYTOLOGIST, 2013, 卷号: 198, 期号: 4, 页码: 1155-1164
作者:  Zou X-H;  Yang Z;  Doyle JA;  Ge S
Adobe PDF(466Kb)  |  收藏  |  浏览/下载：118/0  |  提交时间：2018/12/07
Molecular evolution and expression divergence of the Populus polygalacturonase supergene family shed light on the evolution of increasingly complex organs in plants 期刊论文
NEW PHYTOLOGIST, 2013, 卷号: 197, 期号: 4, 页码: 1353–1365
作者:  Zhi-Ling Yang;  Hai-Jing Liu;  Xiao-Ru Wang;  Qing-Yin Zeng
Adobe PDF(898Kb)  |  收藏  |  浏览/下载：139/0  |  提交时间：2018/12/07
Multilocus estimation of divergence times and ancestral effective population sizes of Oryza species and implications for the rapid diversification of the genus 期刊论文
NEW PHYTOLOGIST, 2013, 卷号: 198, 期号: 4, 页码: 1155-1164
作者:  Zou, Xin-Hui;  Yang, Ziheng;  Doyle, Jeff J.;  Ge, Song
Adobe PDF(465Kb)  |  收藏  |  浏览/下载：44/0  |  提交时间：2023/04/25
divergence time  Oryza  population size  rapid diversification  relaxed clock  
Molecular evolution and expression divergence of the Populus polygalacturonase supergene family shed light on the evolution of increasingly complex organs in plants 期刊论文
NEW PHYTOLOGIST, 2013, 卷号: 197, 期号: 4, 页码: 1353-1365
作者:  Yang, Zhi-Ling;  Liu, Hai-Jing;  Wang, Xiao-Ru;  Zeng, Qing-Yin
Adobe PDF(898Kb)  |  收藏  |  浏览/下载：40/0  |  提交时间：2023/04/25
copy number variation  expression divergence  gene family  selective pressure  subcellular localization